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TNRC18P1 (trinucleotide repeat containing 18 pseudogene 1)

Identity

Alias (NCBI)-
HGNC (Hugo) TNRC18P1
LocusID (NCBI) 644962
Atlas_Id 75041
Location 4q31.21  [Link to chromosome band 4q31]
Location_base_pair Starts at 140641191 and ends at 140643080 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TNRC18P1   43881
Cards
Entrez_Gene (NCBI)TNRC18P1    trinucleotide repeat containing 18 pseudogene 1
Aliases
GeneCards (Weizmann)TNRC18P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr4:140641191-140643080 [Contig_View]  TNRC18P1 [Vega]
TCGA cBioPortalTNRC18P1
AceView (NCBI)TNRC18P1
Genatlas (Paris)TNRC18P1
SOURCE (Princeton)TNRC18P1
Genetics Home Reference (NIH)TNRC18P1
Genomic and cartography
GoldenPath hg38 (UCSC)TNRC18P1  -     chr4:140641191-140643080 -  4q31.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TNRC18P1  -     4q31.21   [Description]    (hg19-Feb_2009)
GoldenPathTNRC18P1 - 4q31.21 [CytoView hg19]  TNRC18P1 - 4q31.21 [CytoView hg38]
Genome Data Viewer NCBITNRC18P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK127954 HY041731
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TNRC18P1
Gene ExpressionTNRC18P1 [ NCBI-GEO ]   TNRC18P1 [ EBI - ARRAY_EXPRESS ]   TNRC18P1 [ SEEK ]   TNRC18P1 [ MEM ]
Gene Expression Viewer (FireBrowse)TNRC18P1 [ Firebrowse - Broad ]
GenevisibleExpression of TNRC18P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644962
GTEX Portal (Tissue expression)TNRC18P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TNRC18P1
Protein Interaction databases
BioGRIDTNRC18P1
STRING (EMBL)TNRC18P1
ZODIACTNRC18P1
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
EVEXTNRC18P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:30 CEST 2021

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