Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TOB1-AS1 (TOB1 antisense RNA 1)


Alias (NCBI)-
HGNC (Hugo) TOB1-AS1
HGNC Previous nameTOB1 antisense RNA 1 (non-protein coding)
LocusID (NCBI) 400604
Atlas_Id 75045
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 50866679 and ends at 50868371 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TOB1-AS1   44340
Entrez_Gene (NCBI)TOB1-AS1    TOB1 antisense RNA 1
GeneCards (Weizmann)TOB1-AS1
Ensembl hg19 (Hinxton)ENSG00000229980 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229980 [Gene_View]  ENSG00000229980 [Sequence]  chr17:50866679-50868371 [Contig_View]  TOB1-AS1 [Vega]
ICGC DataPortalENSG00000229980
TCGA cBioPortalTOB1-AS1
AceView (NCBI)TOB1-AS1
Genatlas (Paris)TOB1-AS1
SOURCE (Princeton)TOB1-AS1
Genetics Home Reference (NIH)TOB1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TOB1-AS1  -     chr17:50866679-50868371 +  17q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOB1-AS1  -     17q21.33   [Description]    (hg19-Feb_2009)
GoldenPathTOB1-AS1 - 17q21.33 [CytoView hg19]  TOB1-AS1 - 17q21.33 [CytoView hg38]
Genome Data Viewer NCBITOB1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK123714 BC039664 BP421960 BQ222352 BU600024
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TOB1-AS1
Gene ExpressionTOB1-AS1 [ NCBI-GEO ]   TOB1-AS1 [ EBI - ARRAY_EXPRESS ]   TOB1-AS1 [ SEEK ]   TOB1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TOB1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TOB1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400604
GTEX Portal (Tissue expression)TOB1-AS1
Human Protein AtlasENSG00000229980-TOB1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TOB1-AS1
Human Protein Atlas [tissue]ENSG00000229980-TOB1-AS1 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:30 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us