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TOGARAM2 (TOG array regulator of axonemal microtubules 2)

Identity

Alias (NCBI)FAM179A
HGNC (Hugo) TOGARAM2
HGNC Alias symbFLJ43249
LOC165186
Crescerin-2
HGNC Alias namecrescerin 2
HGNC Previous nameFAM179A
HGNC Previous namefamily with sequence similarity 179, member A
 family with sequence similarity 179 member A
LocusID (NCBI) 165186
Atlas_Id 79743
Location 2p23.2  [Link to chromosome band 2p23]
Location_base_pair Starts at 28981298 and ends at 29052230 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TOGARAM2   33715
Cards
Entrez_Gene (NCBI)TOGARAM2    TOG array regulator of axonemal microtubules 2
AliasesFAM179A
GeneCards (Weizmann)TOGARAM2
Ensembl hg19 (Hinxton)ENSG00000189350 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189350 [Gene_View]  ENSG00000189350 [Sequence]  chr2:28981298-29052230 [Contig_View]  TOGARAM2 [Vega]
ICGC DataPortalENSG00000189350
TCGA cBioPortalTOGARAM2
AceView (NCBI)TOGARAM2
Genatlas (Paris)TOGARAM2
SOURCE (Princeton)TOGARAM2
Genetics Home Reference (NIH)TOGARAM2
Genomic and cartography
GoldenPath hg38 (UCSC)TOGARAM2  -     chr2:28981298-29052230 +  2p23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOGARAM2  -     2p23.2   [Description]    (hg19-Feb_2009)
GoldenPathTOGARAM2 - 2p23.2 [CytoView hg19]  TOGARAM2 - 2p23.2 [CytoView hg38]
ImmunoBaseENSG00000189350
Genome Data Viewer NCBITOGARAM2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK125239 AK125744 AK296977 BI768759 BQ772038
RefSeq transcript (Entrez)NM_001321538 NM_001321539 NM_199280
Consensus coding sequences : CCDS (NCBI)TOGARAM2
Gene ExpressionTOGARAM2 [ NCBI-GEO ]   TOGARAM2 [ EBI - ARRAY_EXPRESS ]   TOGARAM2 [ SEEK ]   TOGARAM2 [ MEM ]
Gene Expression Viewer (FireBrowse)TOGARAM2 [ Firebrowse - Broad ]
GenevisibleExpression of TOGARAM2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)165186
GTEX Portal (Tissue expression)TOGARAM2
Human Protein AtlasENSG00000189350-TOGARAM2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZUX3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZUX3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZUX3
PhosPhoSitePlusQ6ZUX3
Domains : Interpro (EBI)ARM-like    ARM-type_fold    CLASP_N_dom    TOG   
Domain families : Pfam (Sanger)CLASP_N (PF12348)   
Domain families : Pfam (NCBI)pfam12348   
Domain families : Smart (EMBL)TOG (SM01349)  
Conserved Domain (NCBI)TOGARAM2
SuperfamilyQ6ZUX3
AlphaFold pdb e-kbQ6ZUX3   
Human Protein Atlas [tissue]ENSG00000189350-TOGARAM2 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q6ZUX3
IntAct (EBI)Q6ZUX3
BioGRIDTOGARAM2
STRING (EMBL)TOGARAM2
ZODIACTOGARAM2
Ontologies - Pathways
QuickGOQ6ZUX3
Ontology : AmiGOmicrotubule cytoskeleton organization  microtubule organizing center  spindle microtubule  cytoplasmic microtubule  cilium  microtubule binding  mitotic spindle  mitotic spindle assembly  
Ontology : EGO-EBImicrotubule cytoskeleton organization  microtubule organizing center  spindle microtubule  cytoplasmic microtubule  cilium  microtubule binding  mitotic spindle  mitotic spindle assembly  
NDEx NetworkTOGARAM2
Atlas of Cancer Signalling NetworkTOGARAM2
Wikipedia pathwaysTOGARAM2
Orthology - Evolution
OrthoDB165186
GeneTree (enSembl)ENSG00000189350
Phylogenetic Trees/Animal Genes : TreeFamTOGARAM2
Homologs : HomoloGeneTOGARAM2
Homology/Alignments : Family Browser (UCSC)TOGARAM2
Gene fusions - Rearrangements
Fusion : QuiverTOGARAM2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTOGARAM2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TOGARAM2
dbVarTOGARAM2
ClinVarTOGARAM2
MonarchTOGARAM2
1000_GenomesTOGARAM2 
Exome Variant ServerTOGARAM2
GNOMAD BrowserENSG00000189350
Varsome BrowserTOGARAM2
ACMGTOGARAM2 variants
VarityQ6ZUX3
Genomic Variants (DGV)TOGARAM2 [DGVbeta]
DECIPHERTOGARAM2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTOGARAM2 
Mutations
ICGC Data PortalTOGARAM2 
TCGA Data PortalTOGARAM2 
Broad Tumor PortalTOGARAM2
OASIS PortalTOGARAM2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTOGARAM2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTOGARAM2
Mutations and Diseases : HGMDTOGARAM2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTOGARAM2
DgiDB (Drug Gene Interaction Database)TOGARAM2
DoCM (Curated mutations)TOGARAM2
CIViC (Clinical Interpretations of Variants in Cancer)TOGARAM2
Cancer3DTOGARAM2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTOGARAM2
MedgenTOGARAM2
Genetic Testing Registry TOGARAM2
NextProtQ6ZUX3 [Medical]
GENETestsTOGARAM2
Target ValidationTOGARAM2
Huge Navigator TOGARAM2 [HugePedia]
ClinGenTOGARAM2
Clinical trials, drugs, therapy
MyCancerGenomeTOGARAM2
Protein Interactions : CTDTOGARAM2
Pharm GKB GenePA162387471
PharosQ6ZUX3
Clinical trialTOGARAM2
Miscellaneous
canSAR (ICR)TOGARAM2
HarmonizomeTOGARAM2
DataMed IndexTOGARAM2
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTOGARAM2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:31 CEST 2021

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