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TOMM20L (translocase of outer mitochondrial membrane 20 like)

Identity

Alias_namestranslocase of outer mitochondrial membrane 20 homolog (yeast)-like
Alias_symbol (synonym)UNQ9438
Other alias
HGNC (Hugo) TOMM20L
LocusID (NCBI) 387990
Atlas_Id 75051
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 58395926 and ends at 58408701 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TOMM20L   33752
Cards
Entrez_Gene (NCBI)TOMM20L  387990  translocase of outer mitochondrial membrane 20 like
AliasesUNQ9438
GeneCards (Weizmann)TOMM20L
Ensembl hg19 (Hinxton)ENSG00000196860 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196860 [Gene_View]  chr14:58395926-58408701 [Contig_View]  TOMM20L [Vega]
ICGC DataPortalENSG00000196860
TCGA cBioPortalTOMM20L
AceView (NCBI)TOMM20L
Genatlas (Paris)TOMM20L
WikiGenes387990
SOURCE (Princeton)TOMM20L
Genetics Home Reference (NIH)TOMM20L
Genomic and cartography
GoldenPath hg38 (UCSC)TOMM20L  -     chr14:58395926-58408701 +  14q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOMM20L  -     14q23.1   [Description]    (hg19-Feb_2009)
EnsemblTOMM20L - 14q23.1 [CytoView hg19]  TOMM20L - 14q23.1 [CytoView hg38]
Mapping of homologs : NCBITOMM20L [Mapview hg19]  TOMM20L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY358266 BC137557 BC137563 BC144709
RefSeq transcript (Entrez)NM_207377
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TOMM20L
Cluster EST : UnigeneHs.592307 [ NCBI ]
CGAP (NCI)Hs.592307
Alternative Splicing GalleryENSG00000196860
Gene ExpressionTOMM20L [ NCBI-GEO ]   TOMM20L [ EBI - ARRAY_EXPRESS ]   TOMM20L [ SEEK ]   TOMM20L [ MEM ]
Gene Expression Viewer (FireBrowse)TOMM20L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387990
GTEX Portal (Tissue expression)TOMM20L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXN7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXN7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXN7
Splice isoforms : SwissVarQ6UXN7
PhosPhoSitePlusQ6UXN7
Domains : Interpro (EBI)MAS20    MAS20_rcpt_metazoan    Tom20_dom   
Domain families : Pfam (Sanger)MAS20 (PF02064)   
Domain families : Pfam (NCBI)pfam02064   
Conserved Domain (NCBI)TOMM20L
DMDM Disease mutations387990
Blocks (Seattle)TOMM20L
SuperfamilyQ6UXN7
Human Protein AtlasENSG00000196860
Peptide AtlasQ6UXN7
HPRD18275
IPIIPI00398996   IPI01026234   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXN7
IntAct (EBI)Q6UXN7
FunCoupENSG00000196860
BioGRIDTOMM20L
STRING (EMBL)TOMM20L
ZODIACTOMM20L
Ontologies - Pathways
QuickGOQ6UXN7
Ontology : AmiGOmitochondrial outer membrane translocase complex  protein channel activity  P-P-bond-hydrolysis-driven protein transmembrane transporter activity  tRNA import into mitochondrion  protein import into mitochondrial matrix  mitochondrion targeting sequence binding  integral component of mitochondrial outer membrane  mitochondrial outer membrane translocase complex assembly  
Ontology : EGO-EBImitochondrial outer membrane translocase complex  protein channel activity  P-P-bond-hydrolysis-driven protein transmembrane transporter activity  tRNA import into mitochondrion  protein import into mitochondrial matrix  mitochondrion targeting sequence binding  integral component of mitochondrial outer membrane  mitochondrial outer membrane translocase complex assembly  
NDEx NetworkTOMM20L
Atlas of Cancer Signalling NetworkTOMM20L
Wikipedia pathwaysTOMM20L
Orthology - Evolution
OrthoDB387990
GeneTree (enSembl)ENSG00000196860
Phylogenetic Trees/Animal Genes : TreeFamTOMM20L
HOVERGENQ6UXN7
HOGENOMQ6UXN7
Homologs : HomoloGeneTOMM20L
Homology/Alignments : Family Browser (UCSC)TOMM20L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTOMM20L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TOMM20L
dbVarTOMM20L
ClinVarTOMM20L
1000_GenomesTOMM20L 
Exome Variant ServerTOMM20L
ExAC (Exome Aggregation Consortium)TOMM20L (select the gene name)
Genetic variants : HAPMAP387990
Genomic Variants (DGV)TOMM20L [DGVbeta]
DECIPHERTOMM20L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTOMM20L 
Mutations
ICGC Data PortalTOMM20L 
TCGA Data PortalTOMM20L 
Broad Tumor PortalTOMM20L
OASIS PortalTOMM20L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTOMM20L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTOMM20L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TOMM20L
DgiDB (Drug Gene Interaction Database)TOMM20L
DoCM (Curated mutations)TOMM20L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TOMM20L (select a term)
intoGenTOMM20L
Cancer3DTOMM20L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTOMM20L
Genetic Testing Registry TOMM20L
NextProtQ6UXN7 [Medical]
TSGene387990
GENETestsTOMM20L
Target ValidationTOMM20L
Huge Navigator TOMM20L [HugePedia]
snp3D : Map Gene to Disease387990
BioCentury BCIQTOMM20L
ClinGenTOMM20L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387990
Chemical/Pharm GKB GenePA162406689
Clinical trialTOMM20L
Miscellaneous
canSAR (ICR)TOMM20L (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTOMM20L
EVEXTOMM20L
GoPubMedTOMM20L
iHOPTOMM20L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:42:15 CEST 2017

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