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TOMM22 (translocase of outer mitochondrial membrane 22)

Identity

Alias_namestranslocase of outer mitochondrial membrane 22 homolog (yeast)
Alias_symbol (synonym)TOM22
Other alias1C9-2
MST065
MSTP065
HGNC (Hugo) TOMM22
LocusID (NCBI) 56993
Atlas_Id 42656
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38681949 and ends at 38684761 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
COX4I1 (16q24.1) / TOMM22 (22q13.1)GTPBP1 (22q13.1) / TOMM22 (22q13.1)GTPBP1 22q13.1 / TOMM22 22q13.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TOMM22   18002
Cards
Entrez_Gene (NCBI)TOMM22  56993  translocase of outer mitochondrial membrane 22
Aliases1C9-2; MST065; MSTP065; TOM22
GeneCards (Weizmann)TOMM22
Ensembl hg19 (Hinxton)ENSG00000100216 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100216 [Gene_View]  chr22:38681949-38684761 [Contig_View]  TOMM22 [Vega]
ICGC DataPortalENSG00000100216
TCGA cBioPortalTOMM22
AceView (NCBI)TOMM22
Genatlas (Paris)TOMM22
WikiGenes56993
SOURCE (Princeton)TOMM22
Genetics Home Reference (NIH)TOMM22
Genomic and cartography
GoldenPath hg38 (UCSC)TOMM22  -     chr22:38681949-38684761 +  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOMM22  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblTOMM22 - 22q13.1 [CytoView hg19]  TOMM22 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBITOMM22 [Mapview hg19]  TOMM22 [Mapview hg38]
OMIM607046   
Gene and transcription
Genbank (Entrez)AA522979 AB040119 AB041906 AF163256 AK024731
RefSeq transcript (Entrez)NM_020243
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TOMM22
Cluster EST : UnigeneHs.595072 [ NCBI ]
CGAP (NCI)Hs.595072
Alternative Splicing GalleryENSG00000100216
Gene ExpressionTOMM22 [ NCBI-GEO ]   TOMM22 [ EBI - ARRAY_EXPRESS ]   TOMM22 [ SEEK ]   TOMM22 [ MEM ]
Gene Expression Viewer (FireBrowse)TOMM22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56993
GTEX Portal (Tissue expression)TOMM22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NS69   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NS69  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NS69
Splice isoforms : SwissVarQ9NS69
PhosPhoSitePlusQ9NS69
Domains : Interpro (EBI)Tom22   
Domain families : Pfam (Sanger)Tom22 (PF04281)   
Domain families : Pfam (NCBI)pfam04281   
Conserved Domain (NCBI)TOMM22
DMDM Disease mutations56993
Blocks (Seattle)TOMM22
SuperfamilyQ9NS69
Human Protein AtlasENSG00000100216
Peptide AtlasQ9NS69
HPRD06130
IPIIPI00024976   
Protein Interaction databases
DIP (DOE-UCLA)Q9NS69
IntAct (EBI)Q9NS69
FunCoupENSG00000100216
BioGRIDTOMM22
STRING (EMBL)TOMM22
ZODIACTOMM22
Ontologies - Pathways
QuickGOQ9NS69
Ontology : AmiGOprotein binding  mitochondrial outer membrane  mitochondrial outer membrane translocase complex  mitochondrial inner membrane  protein targeting to mitochondrion  protein transmembrane transporter activity  protein transmembrane transporter activity  protein channel activity  membrane  integral component of membrane  macroautophagy  protein import into mitochondrial matrix  integral component of mitochondrial outer membrane  protein import into mitochondrial outer membrane  
Ontology : EGO-EBIprotein binding  mitochondrial outer membrane  mitochondrial outer membrane translocase complex  mitochondrial inner membrane  protein targeting to mitochondrion  protein transmembrane transporter activity  protein transmembrane transporter activity  protein channel activity  membrane  integral component of membrane  macroautophagy  protein import into mitochondrial matrix  integral component of mitochondrial outer membrane  protein import into mitochondrial outer membrane  
NDEx NetworkTOMM22
Atlas of Cancer Signalling NetworkTOMM22
Wikipedia pathwaysTOMM22
Orthology - Evolution
OrthoDB56993
GeneTree (enSembl)ENSG00000100216
Phylogenetic Trees/Animal Genes : TreeFamTOMM22
HOVERGENQ9NS69
HOGENOMQ9NS69
Homologs : HomoloGeneTOMM22
Homology/Alignments : Family Browser (UCSC)TOMM22
Gene fusions - Rearrangements
Fusion : MitelmanGTPBP1/TOMM22 [22q13.1/22q13.1]  [t(22;22)(q13;q13)]  
Fusion: TCGAGTPBP1 22q13.1 TOMM22 22q13.1 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTOMM22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TOMM22
dbVarTOMM22
ClinVarTOMM22
1000_GenomesTOMM22 
Exome Variant ServerTOMM22
ExAC (Exome Aggregation Consortium)TOMM22 (select the gene name)
Genetic variants : HAPMAP56993
Genomic Variants (DGV)TOMM22 [DGVbeta]
DECIPHERTOMM22 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTOMM22 
Mutations
ICGC Data PortalTOMM22 
TCGA Data PortalTOMM22 
Broad Tumor PortalTOMM22
OASIS PortalTOMM22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTOMM22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTOMM22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TOMM22
DgiDB (Drug Gene Interaction Database)TOMM22
DoCM (Curated mutations)TOMM22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TOMM22 (select a term)
intoGenTOMM22
Cancer3DTOMM22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607046   
Orphanet
MedgenTOMM22
Genetic Testing Registry TOMM22
NextProtQ9NS69 [Medical]
TSGene56993
GENETestsTOMM22
Target ValidationTOMM22
Huge Navigator TOMM22 [HugePedia]
snp3D : Map Gene to Disease56993
BioCentury BCIQTOMM22
ClinGenTOMM22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56993
Chemical/Pharm GKB GenePA38275
Clinical trialTOMM22
Miscellaneous
canSAR (ICR)TOMM22 (select the gene name)
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTOMM22
EVEXTOMM22
GoPubMedTOMM22
iHOPTOMM22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:00:16 CEST 2017

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