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TOMM34 (translocase of outer mitochondrial membrane 34)

Identity

Alias_symbol (synonym)TOM34
HTOM34P
Other aliasURCC3
HGNC (Hugo) TOMM34
LocusID (NCBI) 10953
Atlas_Id 42657
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 44942130 and ends at 44960473 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ERC1 (12p13.33) / TOMM34 (20q13.12)TOMM34 (20q13.12) / ERC1 (12p13.33)ERC1 12p13.33 / TOMM34 20q13.12
TOMM34 20q13.12 / ERC1 12p13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TOMM34   15746
Cards
Entrez_Gene (NCBI)TOMM34  10953  translocase of outer mitochondrial membrane 34
AliasesHTOM34P; TOM34; URCC3
GeneCards (Weizmann)TOMM34
Ensembl hg19 (Hinxton)ENSG00000025772 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000025772 [Gene_View]  chr20:44942130-44960473 [Contig_View]  TOMM34 [Vega]
ICGC DataPortalENSG00000025772
TCGA cBioPortalTOMM34
AceView (NCBI)TOMM34
Genatlas (Paris)TOMM34
WikiGenes10953
SOURCE (Princeton)TOMM34
Genetics Home Reference (NIH)TOMM34
Genomic and cartography
GoldenPath hg38 (UCSC)TOMM34  -     chr20:44942130-44960473 -  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOMM34  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblTOMM34 - 20q13.12 [CytoView hg19]  TOMM34 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBITOMM34 [Mapview hg19]  TOMM34 [Mapview hg38]
OMIM616049   
Gene and transcription
Genbank (Entrez)AB085681 AK000594 AK129538 AK222952 AK302128
RefSeq transcript (Entrez)NM_006809
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TOMM34
Cluster EST : UnigeneHs.517066 [ NCBI ]
CGAP (NCI)Hs.517066
Alternative Splicing GalleryENSG00000025772
Gene ExpressionTOMM34 [ NCBI-GEO ]   TOMM34 [ EBI - ARRAY_EXPRESS ]   TOMM34 [ SEEK ]   TOMM34 [ MEM ]
Gene Expression Viewer (FireBrowse)TOMM34 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10953
GTEX Portal (Tissue expression)TOMM34
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15785   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15785  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15785
Splice isoforms : SwissVarQ15785
PhosPhoSitePlusQ15785
Domaine pattern : Prosite (Expaxy)TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)TPR-contain_dom    TPR-like_helical_dom    TPR_1    TPR_repeat   
Domain families : Pfam (Sanger)TPR_1 (PF00515)   
Domain families : Pfam (NCBI)pfam00515   
Domain families : Smart (EMBL)TPR (SM00028)  
Conserved Domain (NCBI)TOMM34
DMDM Disease mutations10953
Blocks (Seattle)TOMM34
SuperfamilyQ15785
Human Protein AtlasENSG00000025772
Peptide AtlasQ15785
HPRD11641
IPIIPI00009946   IPI00844363   
Protein Interaction databases
DIP (DOE-UCLA)Q15785
IntAct (EBI)Q15785
FunCoupENSG00000025772
BioGRIDTOMM34
STRING (EMBL)TOMM34
ZODIACTOMM34
Ontologies - Pathways
QuickGOQ15785
Ontology : AmiGOprotein binding  nucleus  nucleoplasm  mitochondrial outer membrane  cytosol  protein targeting to mitochondrion  membrane  integral component of membrane  heat shock protein binding  
Ontology : EGO-EBIprotein binding  nucleus  nucleoplasm  mitochondrial outer membrane  cytosol  protein targeting to mitochondrion  membrane  integral component of membrane  heat shock protein binding  
NDEx NetworkTOMM34
Atlas of Cancer Signalling NetworkTOMM34
Wikipedia pathwaysTOMM34
Orthology - Evolution
OrthoDB10953
GeneTree (enSembl)ENSG00000025772
Phylogenetic Trees/Animal Genes : TreeFamTOMM34
HOVERGENQ15785
HOGENOMQ15785
Homologs : HomoloGeneTOMM34
Homology/Alignments : Family Browser (UCSC)TOMM34
Gene fusions - Rearrangements
Fusion : MitelmanERC1/TOMM34 [12p13.33/20q13.12]  [t(12;20)(p13;q13)]  
Fusion : MitelmanTOMM34/ERC1 [20q13.12/12p13.33]  [t(12;20)(p13;q13)]  
Fusion: TCGAERC1 12p13.33 TOMM34 20q13.12 BRCA
Fusion: TCGATOMM34 20q13.12 ERC1 12p13.33 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTOMM34 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TOMM34
dbVarTOMM34
ClinVarTOMM34
1000_GenomesTOMM34 
Exome Variant ServerTOMM34
ExAC (Exome Aggregation Consortium)TOMM34 (select the gene name)
Genetic variants : HAPMAP10953
Genomic Variants (DGV)TOMM34 [DGVbeta]
DECIPHERTOMM34 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTOMM34 
Mutations
ICGC Data PortalTOMM34 
TCGA Data PortalTOMM34 
Broad Tumor PortalTOMM34
OASIS PortalTOMM34 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTOMM34  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTOMM34
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TOMM34
DgiDB (Drug Gene Interaction Database)TOMM34
DoCM (Curated mutations)TOMM34 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TOMM34 (select a term)
intoGenTOMM34
Cancer3DTOMM34(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616049   
Orphanet
MedgenTOMM34
Genetic Testing Registry TOMM34
NextProtQ15785 [Medical]
TSGene10953
GENETestsTOMM34
Target ValidationTOMM34
Huge Navigator TOMM34 [HugePedia]
snp3D : Map Gene to Disease10953
BioCentury BCIQTOMM34
ClinGenTOMM34
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10953
Chemical/Pharm GKB GenePA38032
Clinical trialTOMM34
Miscellaneous
canSAR (ICR)TOMM34 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTOMM34
EVEXTOMM34
GoPubMedTOMM34
iHOPTOMM34
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:00:16 CEST 2017

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