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TOMM7 (translocase of outer mitochondrial membrane 7)

Identity

Alias_namestranslocase of outer mitochondrial membrane 7 homolog (yeast)
Alias_symbol (synonym)Tom7
Other aliasTOM7
HGNC (Hugo) TOMM7
LocusID (NCBI) 54543
Atlas_Id 75055
Location 7p15.3  [Link to chromosome band 7p15]
Location_base_pair Starts at 22812633 and ends at 22822852 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NCBP1 (9q22.33) / TOMM7 (7p15.3)TOMM7 (7p15.3) / KLK2 (19q13.33)TOMM7 (7p15.3) / NCBP1 (9q22.33)
TOMM7 (7p15.3) / SEC13 (3p25.3)YY1AP1 (1q22) / TOMM7 (7p15.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TOMM7   21648
Cards
Entrez_Gene (NCBI)TOMM7  54543  translocase of outer mitochondrial membrane 7
AliasesTOM7
GeneCards (Weizmann)TOMM7
Ensembl hg19 (Hinxton)ENSG00000196683 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196683 [Gene_View]  chr7:22812633-22822852 [Contig_View]  TOMM7 [Vega]
ICGC DataPortalENSG00000196683
TCGA cBioPortalTOMM7
AceView (NCBI)TOMM7
Genatlas (Paris)TOMM7
WikiGenes54543
SOURCE (Princeton)TOMM7
Genetics Home Reference (NIH)TOMM7
Genomic and cartography
GoldenPath hg38 (UCSC)TOMM7  -     chr7:22812633-22822852 -  7p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOMM7  -     7p15.3   [Description]    (hg19-Feb_2009)
EnsemblTOMM7 - 7p15.3 [CytoView hg19]  TOMM7 - 7p15.3 [CytoView hg38]
Mapping of homologs : NCBITOMM7 [Mapview hg19]  TOMM7 [Mapview hg38]
OMIM607980   
Gene and transcription
Genbank (Entrez)AA181858 AF086336 AF150733 AJ011007 AK026520
RefSeq transcript (Entrez)NM_019059
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TOMM7
Cluster EST : UnigeneHs.112318 [ NCBI ]
CGAP (NCI)Hs.112318
Alternative Splicing GalleryENSG00000196683
Gene ExpressionTOMM7 [ NCBI-GEO ]   TOMM7 [ EBI - ARRAY_EXPRESS ]   TOMM7 [ SEEK ]   TOMM7 [ MEM ]
Gene Expression Viewer (FireBrowse)TOMM7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54543
GTEX Portal (Tissue expression)TOMM7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P0U1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P0U1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P0U1
Splice isoforms : SwissVarQ9P0U1
PhosPhoSitePlusQ9P0U1
Domains : Interpro (EBI)Tom7   
Domain families : Pfam (Sanger)Tom7 (PF08038)   
Domain families : Pfam (NCBI)pfam08038   
Conserved Domain (NCBI)TOMM7
DMDM Disease mutations54543
Blocks (Seattle)TOMM7
SuperfamilyQ9P0U1
Human Protein AtlasENSG00000196683
Peptide AtlasQ9P0U1
HPRD16266
IPIIPI00000980   IPI00893097   IPI00893222   
Protein Interaction databases
DIP (DOE-UCLA)Q9P0U1
IntAct (EBI)Q9P0U1
FunCoupENSG00000196683
BioGRIDTOMM7
STRING (EMBL)TOMM7
ZODIACTOMM7
Ontologies - Pathways
QuickGOQ9P0U1
Ontology : AmiGOprotein binding  mitochondrion  mitochondrial outer membrane  mitochondrial outer membrane translocase complex  mitochondrial outer membrane translocase complex  protein targeting to mitochondrion  protein transmembrane transporter activity  protein channel activity  macroautophagy  protein import into mitochondrial matrix  integral component of mitochondrial outer membrane  regulation of protein stability  protein import into mitochondrial outer membrane  positive regulation of macromitophagy in response to mitochondrial depolarization  positive regulation of protein targeting to mitochondrion  
Ontology : EGO-EBIprotein binding  mitochondrion  mitochondrial outer membrane  mitochondrial outer membrane translocase complex  mitochondrial outer membrane translocase complex  protein targeting to mitochondrion  protein transmembrane transporter activity  protein channel activity  macroautophagy  protein import into mitochondrial matrix  integral component of mitochondrial outer membrane  regulation of protein stability  protein import into mitochondrial outer membrane  positive regulation of macromitophagy in response to mitochondrial depolarization  positive regulation of protein targeting to mitochondrion  
NDEx NetworkTOMM7
Atlas of Cancer Signalling NetworkTOMM7
Wikipedia pathwaysTOMM7
Orthology - Evolution
OrthoDB54543
GeneTree (enSembl)ENSG00000196683
Phylogenetic Trees/Animal Genes : TreeFamTOMM7
HOVERGENQ9P0U1
HOGENOMQ9P0U1
Homologs : HomoloGeneTOMM7
Homology/Alignments : Family Browser (UCSC)TOMM7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTOMM7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TOMM7
dbVarTOMM7
ClinVarTOMM7
1000_GenomesTOMM7 
Exome Variant ServerTOMM7
ExAC (Exome Aggregation Consortium)TOMM7 (select the gene name)
Genetic variants : HAPMAP54543
Genomic Variants (DGV)TOMM7 [DGVbeta]
DECIPHERTOMM7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTOMM7 
Mutations
ICGC Data PortalTOMM7 
TCGA Data PortalTOMM7 
Broad Tumor PortalTOMM7
OASIS PortalTOMM7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTOMM7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTOMM7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TOMM7
DgiDB (Drug Gene Interaction Database)TOMM7
DoCM (Curated mutations)TOMM7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TOMM7 (select a term)
intoGenTOMM7
Cancer3DTOMM7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607980   
Orphanet
MedgenTOMM7
Genetic Testing Registry TOMM7
NextProtQ9P0U1 [Medical]
TSGene54543
GENETestsTOMM7
Target ValidationTOMM7
Huge Navigator TOMM7 [HugePedia]
snp3D : Map Gene to Disease54543
BioCentury BCIQTOMM7
ClinGenTOMM7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54543
Chemical/Pharm GKB GenePA134864325
Clinical trialTOMM7
Miscellaneous
canSAR (ICR)TOMM7 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTOMM7
EVEXTOMM7
GoPubMedTOMM7
iHOPTOMM7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:46:43 CEST 2017

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