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TOP1P1 (DNA topoisomerase I pseudogene 1)

Identity

Alias (NCBI)-
HGNC (Hugo) TOP1P1
LocusID (NCBI) 7151
Atlas_Id 75056
Location 1q24.3  [Link to chromosome band 1q24]
Location_base_pair Starts at 171338896 and ends at 171341324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TOP1P1   11987
Cards
Entrez_Gene (NCBI)TOP1P1    DNA topoisomerase I pseudogene 1
Aliases
GeneCards (Weizmann)TOP1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:171338896-171341324 [Contig_View]  TOP1P1 [Vega]
TCGA cBioPortalTOP1P1
AceView (NCBI)TOP1P1
Genatlas (Paris)TOP1P1
SOURCE (Princeton)TOP1P1
Genetics Home Reference (NIH)TOP1P1
Genomic and cartography
GoldenPath hg38 (UCSC)TOP1P1  -     chr1:171338896-171341324 +  1q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOP1P1  -     1q24.3   [Description]    (hg19-Feb_2009)
GoldenPathTOP1P1 - 1q24.3 [CytoView hg19]  TOP1P1 - 1q24.3 [CytoView hg38]
Genome Data Viewer NCBITOP1P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)M55632
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TOP1P1
Gene ExpressionTOP1P1 [ NCBI-GEO ]   TOP1P1 [ EBI - ARRAY_EXPRESS ]   TOP1P1 [ SEEK ]   TOP1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)TOP1P1 [ Firebrowse - Broad ]
GenevisibleExpression of TOP1P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7151
GTEX Portal (Tissue expression)TOP1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TOP1P1
Protein Interaction databases
BioGRIDTOP1P1
STRING (EMBL)TOP1P1
ZODIACTOP1P1
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTOP1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:33 CEST 2021

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