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TOP1P1 (DNA topoisomerase I pseudogene 1)


Alias (NCBI)-
HGNC (Hugo) TOP1P1
LocusID (NCBI) 7151
Atlas_Id 75056
Location 1q24.3  [Link to chromosome band 1q24]
Location_base_pair Starts at 171338896 and ends at 171341324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TOP1P1   11987
Entrez_Gene (NCBI)TOP1P1    DNA topoisomerase I pseudogene 1
GeneCards (Weizmann)TOP1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:171338896-171341324 [Contig_View]  TOP1P1 [Vega]
TCGA cBioPortalTOP1P1
AceView (NCBI)TOP1P1
Genatlas (Paris)TOP1P1
SOURCE (Princeton)TOP1P1
Genetics Home Reference (NIH)TOP1P1
Genomic and cartography
GoldenPath hg38 (UCSC)TOP1P1  -     chr1:171338896-171341324 +  1q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOP1P1  -     1q24.3   [Description]    (hg19-Feb_2009)
GoldenPathTOP1P1 - 1q24.3 [CytoView hg19]  TOP1P1 - 1q24.3 [CytoView hg38]
Genome Data Viewer NCBITOP1P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)M55632
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TOP1P1
Gene ExpressionTOP1P1 [ NCBI-GEO ]   TOP1P1 [ EBI - ARRAY_EXPRESS ]   TOP1P1 [ SEEK ]   TOP1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)TOP1P1 [ Firebrowse - Broad ]
GenevisibleExpression of TOP1P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7151
GTEX Portal (Tissue expression)TOP1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TOP1P1
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:33 CEST 2021

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