Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TOP1P2 (topoisomerase (DNA) I pseudogene 2)

Identity

Other alias-
HGNC (Hugo) TOP1P2
LocusID (NCBI) 7152
Atlas_Id 75057
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 24764501 and ends at 24766019 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TOP1P2   11988
Cards
Entrez_Gene (NCBI)TOP1P2  7152  topoisomerase (DNA) I pseudogene 2
Aliases
GeneCards (Weizmann)TOP1P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:24764501-24766019 [Contig_View]  TOP1P2 [Vega]
TCGA cBioPortalTOP1P2
AceView (NCBI)TOP1P2
Genatlas (Paris)TOP1P2
WikiGenes7152
SOURCE (Princeton)TOP1P2
Genetics Home Reference (NIH)TOP1P2
Genomic and cartography
GoldenPath hg38 (UCSC)TOP1P2  -     chr22:24764501-24766019 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOP1P2  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblTOP1P2 - 22q11.23 [CytoView hg19]  TOP1P2 - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBITOP1P2 [Mapview hg19]  TOP1P2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)M55630
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TOP1P2
Cluster EST : UnigeneHs.381281 [ NCBI ]
CGAP (NCI)Hs.381281
Gene ExpressionTOP1P2 [ NCBI-GEO ]   TOP1P2 [ EBI - ARRAY_EXPRESS ]   TOP1P2 [ SEEK ]   TOP1P2 [ MEM ]
Gene Expression Viewer (FireBrowse)TOP1P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7152
GTEX Portal (Tissue expression)TOP1P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TOP1P2
DMDM Disease mutations7152
Blocks (Seattle)TOP1P2
IPIIPI00984012   
Protein Interaction databases
BioGRIDTOP1P2
STRING (EMBL)TOP1P2
ZODIACTOP1P2
Ontologies - Pathways
Huge Navigator TOP1P2 [HugePedia]
snp3D : Map Gene to Disease7152
BioCentury BCIQTOP1P2
ClinGenTOP1P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7152
Chemical/Pharm GKB GenePA36671
Clinical trialTOP1P2
Miscellaneous
canSAR (ICR)TOP1P2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTOP1P2
EVEXTOP1P2
GoPubMedTOP1P2
iHOPTOP1P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:59:14 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.