Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TOP1P2 (DNA topoisomerase I pseudogene 2)

Identity

Alias (NCBI)-
HGNC (Hugo) TOP1P2
LocusID (NCBI) 7152
Atlas_Id 75057
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 24764501 and ends at 24766019 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TOP1P2   11988
Cards
Entrez_Gene (NCBI)TOP1P2    DNA topoisomerase I pseudogene 2
Aliases
GeneCards (Weizmann)TOP1P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr22:24764501-24766019 [Contig_View]  TOP1P2 [Vega]
TCGA cBioPortalTOP1P2
AceView (NCBI)TOP1P2
Genatlas (Paris)TOP1P2
SOURCE (Princeton)TOP1P2
Genetics Home Reference (NIH)TOP1P2
Genomic and cartography
GoldenPath hg38 (UCSC)TOP1P2  -     chr22:24764501-24766019 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOP1P2  -     22q11.23   [Description]    (hg19-Feb_2009)
GoldenPathTOP1P2 - 22q11.23 [CytoView hg19]  TOP1P2 - 22q11.23 [CytoView hg38]
Genome Data Viewer NCBITOP1P2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)M55630
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TOP1P2
Gene ExpressionTOP1P2 [ NCBI-GEO ]   TOP1P2 [ EBI - ARRAY_EXPRESS ]   TOP1P2 [ SEEK ]   TOP1P2 [ MEM ]
Gene Expression Viewer (FireBrowse)TOP1P2 [ Firebrowse - Broad ]
GenevisibleExpression of TOP1P2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7152
GTEX Portal (Tissue expression)TOP1P2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TOP1P2
Protein Interaction databases
BioGRIDTOP1P2
STRING (EMBL)TOP1P2
ZODIACTOP1P2
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTOP1P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:33 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.