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TOR1B (torsin family 1 member B)

Identity

Alias (NCBI)DQ1
HGNC (Hugo) TOR1B
HGNC Alias symbDQ1
MGC4386
HGNC Alias nametorsin B
HGNC Previous nametorsin family 1, member B (torsin B)
LocusID (NCBI) 27348
Atlas_Id 75063
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 129803184 and ends at 129811281 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TOR1B (9q34.11) / ARHGAP27 (17q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TOR1B   11995
Cards
Entrez_Gene (NCBI)TOR1B    torsin family 1 member B
AliasesDQ1
GeneCards (Weizmann)TOR1B
Ensembl hg19 (Hinxton)ENSG00000136816 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136816 [Gene_View]  ENSG00000136816 [Sequence]  chr9:129803184-129811281 [Contig_View]  TOR1B [Vega]
ICGC DataPortalENSG00000136816
TCGA cBioPortalTOR1B
AceView (NCBI)TOR1B
Genatlas (Paris)TOR1B
SOURCE (Princeton)TOR1B
Genetics Home Reference (NIH)TOR1B
Genomic and cartography
GoldenPath hg38 (UCSC)TOR1B  -     chr9:129803184-129811281 +  9q34.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TOR1B  -     9q34.11   [Description]    (hg19-Feb_2009)
GoldenPathTOR1B - 9q34.11 [CytoView hg19]  TOR1B - 9q34.11 [CytoView hg38]
ImmunoBaseENSG00000136816
Genome Data Viewer NCBITOR1B [Mapview hg19]  
OMIM608050   
Gene and transcription
Genbank (Entrez)AF007872 AF317129 AI568476 BC006480 BC015578
RefSeq transcript (Entrez)NM_001317893 NM_001317894 NM_014506
Consensus coding sequences : CCDS (NCBI)TOR1B
Gene ExpressionTOR1B [ NCBI-GEO ]   TOR1B [ EBI - ARRAY_EXPRESS ]   TOR1B [ SEEK ]   TOR1B [ MEM ]
Gene Expression Viewer (FireBrowse)TOR1B [ Firebrowse - Broad ]
GenevisibleExpression of TOR1B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27348
GTEX Portal (Tissue expression)TOR1B
Human Protein AtlasENSG00000136816-TOR1B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14657   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14657  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14657
Catalytic activity : Enzyme3.6.4.- [ Enzyme-Expasy ]   3.6.4.-3.6.4.- [ IntEnz-EBI ]   3.6.4.- [ BRENDA ]   3.6.4.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusO14657
Domains : Interpro (EBI)P-loop_NTPase    Torsin    Torsin-1B    Torsin_1/2   
Domain families : Pfam (Sanger)Torsin (PF06309)   
Domain families : Pfam (NCBI)pfam06309   
Conserved Domain (NCBI)TOR1B
SuperfamilyO14657
AlphaFold pdb e-kbO14657   
Human Protein Atlas [tissue]ENSG00000136816-TOR1B [tissue]
HPRD16270
Protein Interaction databases
DIP (DOE-UCLA)O14657
IntAct (EBI)O14657
BioGRIDTOR1B
STRING (EMBL)TOR1B
ZODIACTOR1B
Ontologies - Pathways
QuickGOO14657
Ontology : AmiGOprotein binding  ATP binding  nuclear envelope  nuclear envelope  endoplasmic reticulum  endoplasmic reticulum lumen  endoplasmic reticulum lumen  response to unfolded protein  endoplasmic reticulum organization  ATPase  kinesin binding  nuclear membrane  protein localization to nucleus  identical protein binding  chaperone cofactor-dependent protein refolding  extracellular exosome  nuclear membrane organization  ATP hydrolysis activity  
Ontology : EGO-EBIprotein binding  ATP binding  nuclear envelope  nuclear envelope  endoplasmic reticulum  endoplasmic reticulum lumen  endoplasmic reticulum lumen  response to unfolded protein  endoplasmic reticulum organization  ATPase  kinesin binding  nuclear membrane  protein localization to nucleus  identical protein binding  chaperone cofactor-dependent protein refolding  extracellular exosome  nuclear membrane organization  ATP hydrolysis activity  
NDEx NetworkTOR1B
Atlas of Cancer Signalling NetworkTOR1B
Wikipedia pathwaysTOR1B
Orthology - Evolution
OrthoDB27348
GeneTree (enSembl)ENSG00000136816
Phylogenetic Trees/Animal Genes : TreeFamTOR1B
Homologs : HomoloGeneTOR1B
Homology/Alignments : Family Browser (UCSC)TOR1B
Gene fusions - Rearrangements
Fusion : QuiverTOR1B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTOR1B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TOR1B
dbVarTOR1B
ClinVarTOR1B
MonarchTOR1B
1000_GenomesTOR1B 
Exome Variant ServerTOR1B
GNOMAD BrowserENSG00000136816
Varsome BrowserTOR1B
ACMGTOR1B variants
VarityO14657
Genomic Variants (DGV)TOR1B [DGVbeta]
DECIPHERTOR1B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTOR1B 
Mutations
ICGC Data PortalTOR1B 
TCGA Data PortalTOR1B 
Broad Tumor PortalTOR1B
OASIS PortalTOR1B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTOR1B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTOR1B
Mutations and Diseases : HGMDTOR1B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTOR1B
DgiDB (Drug Gene Interaction Database)TOR1B
DoCM (Curated mutations)TOR1B
CIViC (Clinical Interpretations of Variants in Cancer)TOR1B
Cancer3DTOR1B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608050   
Orphanet
DisGeNETTOR1B
MedgenTOR1B
Genetic Testing Registry TOR1B
NextProtO14657 [Medical]
GENETestsTOR1B
Target ValidationTOR1B
Huge Navigator TOR1B [HugePedia]
ClinGenTOR1B
Clinical trials, drugs, therapy
MyCancerGenomeTOR1B
Protein Interactions : CTDTOR1B
Pharm GKB GenePA36676
PharosO14657
Clinical trialTOR1B
Miscellaneous
canSAR (ICR)TOR1B
HarmonizomeTOR1B
DataMed IndexTOR1B
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTOR1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:34 CEST 2021

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