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TP53AIP1 (tumor protein p53 regulated apoptosis inducing protein 1)

Identity

Alias_symbol (synonym)p53AIP1
Other aliasP53AIP1
HGNC (Hugo) TP53AIP1
LocusID (NCBI) 63970
Atlas_Id 50785
Location 11q24.3  [Link to chromosome band 11q24]
Location_base_pair Starts at 128935371 and ends at 128937834 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TP53AIP1   29984
Cards
Entrez_Gene (NCBI)TP53AIP1  63970  tumor protein p53 regulated apoptosis inducing protein 1
AliasesP53AIP1
GeneCards (Weizmann)TP53AIP1
Ensembl hg19 (Hinxton)ENSG00000120471 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120471 [Gene_View]  chr11:128935371-128937834 [Contig_View]  TP53AIP1 [Vega]
ICGC DataPortalENSG00000120471
TCGA cBioPortalTP53AIP1
AceView (NCBI)TP53AIP1
Genatlas (Paris)TP53AIP1
WikiGenes63970
SOURCE (Princeton)TP53AIP1
Genetics Home Reference (NIH)TP53AIP1
Genomic and cartography
GoldenPath hg38 (UCSC)TP53AIP1  -     chr11:128935371-128937834 -  11q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TP53AIP1  -     11q24.3   [Description]    (hg19-Feb_2009)
EnsemblTP53AIP1 - 11q24.3 [CytoView hg19]  TP53AIP1 - 11q24.3 [CytoView hg38]
Mapping of homologs : NCBITP53AIP1 [Mapview hg19]  TP53AIP1 [Mapview hg38]
OMIM605426   
Gene and transcription
Genbank (Entrez)AB045830 AB045831 AB045832 AI872153 AI924030
RefSeq transcript (Entrez)NM_001195194 NM_001195195 NM_001251964 NM_022112
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TP53AIP1
Cluster EST : UnigeneHs.160953 [ NCBI ]
CGAP (NCI)Hs.160953
Alternative Splicing GalleryENSG00000120471
Gene ExpressionTP53AIP1 [ NCBI-GEO ]   TP53AIP1 [ EBI - ARRAY_EXPRESS ]   TP53AIP1 [ SEEK ]   TP53AIP1 [ MEM ]
Gene Expression Viewer (FireBrowse)TP53AIP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63970
GTEX Portal (Tissue expression)TP53AIP1
Human Protein AtlasENSG00000120471-TP53AIP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCN2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCN2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCN2
Splice isoforms : SwissVarQ9HCN2
PhosPhoSitePlusQ9HCN2
Domains : Interpro (EBI)TP53AIP1   
Domain families : Pfam (Sanger)TPIP1 (PF15338)   
Domain families : Pfam (NCBI)pfam15338   
Conserved Domain (NCBI)TP53AIP1
DMDM Disease mutations63970
Blocks (Seattle)TP53AIP1
SuperfamilyQ9HCN2
Human Protein Atlas [tissue]ENSG00000120471-TP53AIP1 [tissue]
Peptide AtlasQ9HCN2
HPRD10397
IPIIPI00032157   IPI00856070   IPI00395328   IPI00855993   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCN2
IntAct (EBI)Q9HCN2
FunCoupENSG00000120471
BioGRIDTP53AIP1
STRING (EMBL)TP53AIP1
ZODIACTP53AIP1
Ontologies - Pathways
QuickGOQ9HCN2
Ontology : AmiGOmolecular_function  mitochondrion  mitochondrial matrix  apoptotic process  regulation of apoptotic process  
Ontology : EGO-EBImolecular_function  mitochondrion  mitochondrial matrix  apoptotic process  regulation of apoptotic process  
Pathways : KEGGp53 signaling pathway   
NDEx NetworkTP53AIP1
Atlas of Cancer Signalling NetworkTP53AIP1
Wikipedia pathwaysTP53AIP1
Orthology - Evolution
OrthoDB63970
GeneTree (enSembl)ENSG00000120471
Phylogenetic Trees/Animal Genes : TreeFamTP53AIP1
HOVERGENQ9HCN2
HOGENOMQ9HCN2
Homologs : HomoloGeneTP53AIP1
Homology/Alignments : Family Browser (UCSC)TP53AIP1
Gene fusions - Rearrangements
Tumor Fusion PortalTP53AIP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53AIP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53AIP1
dbVarTP53AIP1
ClinVarTP53AIP1
1000_GenomesTP53AIP1 
Exome Variant ServerTP53AIP1
ExAC (Exome Aggregation Consortium)ENSG00000120471
GNOMAD BrowserENSG00000120471
Genetic variants : HAPMAP63970
Genomic Variants (DGV)TP53AIP1 [DGVbeta]
DECIPHERTP53AIP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTP53AIP1 
Mutations
ICGC Data PortalTP53AIP1 
TCGA Data PortalTP53AIP1 
Broad Tumor PortalTP53AIP1
OASIS PortalTP53AIP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTP53AIP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTP53AIP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TP53AIP1
DgiDB (Drug Gene Interaction Database)TP53AIP1
DoCM (Curated mutations)TP53AIP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TP53AIP1 (select a term)
intoGenTP53AIP1
Cancer3DTP53AIP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605426   
Orphanet
DisGeNETTP53AIP1
MedgenTP53AIP1
Genetic Testing Registry TP53AIP1
NextProtQ9HCN2 [Medical]
TSGene63970
GENETestsTP53AIP1
Target ValidationTP53AIP1
Huge Navigator TP53AIP1 [HugePedia]
snp3D : Map Gene to Disease63970
BioCentury BCIQTP53AIP1
ClinGenTP53AIP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD63970
Chemical/Pharm GKB GenePA164726680
Clinical trialTP53AIP1
Miscellaneous
canSAR (ICR)TP53AIP1 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTP53AIP1
EVEXTP53AIP1
GoPubMedTP53AIP1
iHOPTP53AIP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:39:18 CET 2017

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