Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TP53BP1 (tumor protein p53 binding protein 1)

Identity

Other names53BP1
FLJ41424
MGC138366
p202
HGNC TP53BP1
Location 15q15-q21
Location_base_pair Starts at 41486699 and ends at 41590028 bp from pter (hg18-March_2006).
Note

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNCTP53BP1   11999
Entrez_GeneTP53BP1  7158  tumor protein p53 binding protein 1
Cards
GeneCardsTP53BP1
EnsemblTP53BP1 [Search_View]   ENSG00000067369 [Gene_View]
GenatlasTP53BP1
GeneLynxTP53BP1
eGenomeTP53BP1
euGene7158
Genomic and cartography
GoldenPathTP53BP1  -     chr15:41486699-41590028 -  15q15.3   [Description]    (hg18-March_2006)
EnsemblTP53BP1 - 15q15.3 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneTP53BP1
Gene and transcription
GenbankAB210025 [ ENTREZ ]
GenbankAF078776 [ ENTREZ ]
GenbankAK123418 [ ENTREZ ]
GenbankAK292915 [ ENTREZ ]
GenbankAK307405 [ ENTREZ ]
RefSeqNM_005657 [ SRS ]    NM_005657 [ ENTREZ ]
RefSeqAC_000058 [ SRS ]    AC_000058 [ ENTREZ ]
RefSeqAC_000147 [ SRS ]    AC_000147 [ ENTREZ ]
RefSeqNC_000015 [ SRS ]    NC_000015 [ ENTREZ ]
RefSeqNT_010194 [ SRS ]    NT_010194 [ ENTREZ ]
RefSeqNW_001838214 [ SRS ]    NW_001838214 [ ENTREZ ]
RefSeqNW_925840 [ SRS ]    NW_925840 [ ENTREZ ]
AceViewTP53BP1 AceView - NCBI
UnigeneHs.440968 [ SRS ]    Hs.440968 [ NCBI ]     HS440968 [ spliceNest ]
Fast-db3537 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ12888 [ SRS]    Q12888 [ EXPASY ]     Q12888 [ INTERPRO ]     Q12888 [ UNIPROT ]
PrositePS50172 BRCT [ SRS ]    PS50172 BRCT [ Expasy ]
InterproIPR015125 53-BP1_Tudor [ SRS ]    IPR015125 53-BP1_Tudor [ EBI ]
InterproIPR001357 BRCT [ SRS ]    IPR001357 BRCT [ EBI ]
InterproIPR014722 Transl_SH3_like_sub [ SRS ]    IPR014722 Transl_SH3_like_sub [ EBI ]
CluSTrQ12888
PfamPF09038 53-BP1_Tudor [ SRS ]    PF09038 53-BP1_Tudor [ Sanger ]    pfam09038 [ NCBI-CDD ]
PfamPF00533 BRCT [ SRS ]    PF00533 BRCT [ Sanger ]    pfam00533 [ NCBI-CDD ]
SmartSM00292 BRCT [EMBL]
BlocksQ12888
PDB1GZH [ SRS ]    1GZH [ PdbSum ],   1GZH [ IMB ]   1GZH [ RSDB ]
PDB1KZY [ SRS ]    1KZY [ PdbSum ],   1KZY [ IMB ]   1KZY [ RSDB ]
PDB1XNI [ SRS ]    1XNI [ PdbSum ],   1XNI [ IMB ]   1XNI [ RSDB ]
PDB2G3R [ SRS ]    2G3R [ PdbSum ],   2G3R [ IMB ]   2G3R [ RSDB ]
PDB2IG0 [ SRS ]    2IG0 [ PdbSum ],   2IG0 [ IMB ]   2IG0 [ RSDB ]
HPRD05569
Protein Interaction databases
DIPQ12888
IntActQ12888
Polymorphism : SNP, mutations, diseases
OMIM605230    [ map ]   
GENECLINICS605230
SNPTP53BP1 [dbSNP-NCBI]  
SNPNM_005657 [SNP-NCI]  
SNPTP53BP1 [GeneSNPs - Utah]  TP53BP1] [HGBASE - SRS]
HAPMAPTP53BP1 [HAPMAP]  
COSMICTP53BP1 [Somatic mutation (COSMIC-CGP-Sanger)]  
TICdbcondensed [Translocation breakpoints In Cancer]  
HGMDTP53BP1
General knowledge
Family BrowserTP53BP1 [UCSC Family Browser]
SOURCENM_005657
SMDHs.440968
SAGEHs.440968
GOcondensed chromosome kinetochore [Amigo]  condensed chromosome kinetochore
GOdamaged DNA binding [Amigo]  damaged DNA binding
GOprotein binding [Amigo]  protein binding
GOintracellular [Amigo]  intracellular
GOnucleus [Amigo]  nucleus
GOnucleoplasm [Amigo]  nucleoplasm
GOnucleoplasm [Amigo]  nucleoplasm
GOreplication fork [Amigo]  replication fork
GOcytoplasm [Amigo]  cytoplasm
GODNA repair [Amigo]  DNA repair
GOtranscription [Amigo]  transcription
GOtranscription activator activity [Amigo]  transcription activator activity
GOpositive regulation of transcription, DNA-dependent [Amigo]  positive regulation of transcription, DNA-dependent
PubGeneTP53BP1
TreeFamTP53BP1
CTD7158 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeTP53BP1 Related clones (RZPD - Berlin)
PubMed
PubMed66 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2008Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Oct 11 13:35:57 2008


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

j.l.huret@chu-poitiers.fr.