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TP53I13 (tumor protein p53 inducible protein 13)

Identity

Alias_symbol (synonym)DSCP1
Other alias
HGNC (Hugo) TP53I13
LocusID (NCBI) 90313
Atlas_Id 43094
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 27895739 and ends at 27900175 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
TP53I13 (17q11.2) / TP53I13 (17q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TP53I13   25102
Cards
Entrez_Gene (NCBI)TP53I13  90313  tumor protein p53 inducible protein 13
AliasesDSCP1
GeneCards (Weizmann)TP53I13
Ensembl hg19 (Hinxton)ENSG00000167543 [Gene_View]  chr17:27895739-27900175 [Contig_View]  TP53I13 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167543 [Gene_View]  chr17:27895739-27900175 [Contig_View]  TP53I13 [Vega]
ICGC DataPortalENSG00000167543
TCGA cBioPortalTP53I13
AceView (NCBI)TP53I13
Genatlas (Paris)TP53I13
WikiGenes90313
SOURCE (Princeton)TP53I13
Genetics Home Reference (NIH)TP53I13
Genomic and cartography
GoldenPath hg19 (UCSC)TP53I13  -     chr17:27895739-27900175 +  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TP53I13  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblTP53I13 - 17q11.2 [CytoView hg19]  TP53I13 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBITP53I13 [Mapview hg19]  TP53I13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB110209 AK075341 AK093030 AL137404 BC001593
RefSeq transcript (Entrez)NM_138349
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)TP53I13
Cluster EST : UnigeneHs.514050 [ NCBI ]
CGAP (NCI)Hs.514050
Alternative Splicing GalleryENSG00000167543
Gene ExpressionTP53I13 [ NCBI-GEO ]   TP53I13 [ EBI - ARRAY_EXPRESS ]   TP53I13 [ SEEK ]   TP53I13 [ MEM ]
Gene Expression Viewer (FireBrowse)TP53I13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90313
GTEX Portal (Tissue expression)TP53I13
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBR0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBR0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBR0
Splice isoforms : SwissVarQ8NBR0
PhosPhoSitePlusQ8NBR0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TP53I13
DMDM Disease mutations90313
Blocks (Seattle)TP53I13
SuperfamilyQ8NBR0
Human Protein AtlasENSG00000167543
Peptide AtlasQ8NBR0
HPRD14267
IPIIPI00141614   IPI00017919   
Protein Interaction databases
DIP (DOE-UCLA)Q8NBR0
IntAct (EBI)Q8NBR0
FunCoupENSG00000167543
BioGRIDTP53I13
STRING (EMBL)TP53I13
ZODIACTP53I13
Ontologies - Pathways
QuickGOQ8NBR0
Ontology : AmiGOcytoplasm  plasma membrane  integral component of membrane  
Ontology : EGO-EBIcytoplasm  plasma membrane  integral component of membrane  
NDEx NetworkTP53I13
Atlas of Cancer Signalling NetworkTP53I13
Wikipedia pathwaysTP53I13
Orthology - Evolution
OrthoDB90313
GeneTree (enSembl)ENSG00000167543
Phylogenetic Trees/Animal Genes : TreeFamTP53I13
HOVERGENQ8NBR0
HOGENOMQ8NBR0
Homologs : HomoloGeneTP53I13
Homology/Alignments : Family Browser (UCSC)TP53I13
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53I13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53I13
dbVarTP53I13
ClinVarTP53I13
1000_GenomesTP53I13 
Exome Variant ServerTP53I13
ExAC (Exome Aggregation Consortium)TP53I13 (select the gene name)
Genetic variants : HAPMAP90313
Genomic Variants (DGV)TP53I13 [DGVbeta]
DECIPHER (Syndromes)17:27895739-27900175  ENSG00000167543
CONAN: Copy Number AnalysisTP53I13 
Mutations
ICGC Data PortalTP53I13 
TCGA Data PortalTP53I13 
Broad Tumor PortalTP53I13
OASIS PortalTP53I13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTP53I13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTP53I13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TP53I13
DgiDB (Drug Gene Interaction Database)TP53I13
DoCM (Curated mutations)TP53I13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TP53I13 (select a term)
intoGenTP53I13
Cancer3DTP53I13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTP53I13
Genetic Testing Registry TP53I13
NextProtQ8NBR0 [Medical]
TSGene90313
GENETestsTP53I13
Huge Navigator TP53I13 [HugePedia]
snp3D : Map Gene to Disease90313
BioCentury BCIQTP53I13
ClinGenTP53I13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90313
Chemical/Pharm GKB GenePA143485659
Clinical trialTP53I13
Miscellaneous
canSAR (ICR)TP53I13 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTP53I13
EVEXTP53I13
GoPubMedTP53I13
iHOPTP53I13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:23:08 CEST 2017

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