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TP53INP2 (tumor protein p53 inducible nuclear protein 2)

Identity

Alias (NCBI)C20orf110
DOR
PIG-U
PIGU
PINH
dJ1181N3.1
HGNC (Hugo) TP53INP2
HGNC Alias symbFLJ21759
FLJ23500
DKFZp434B2411
DKFZp434O0827
dJ1181N3.1
PINH
DOR
HGNC Alias namediabetes and obesity regulated
HGNC Previous nameC20orf110
HGNC Previous namechromosome 20 open reading frame 110
LocusID (NCBI) 58476
Atlas_Id 42920
Location 20q11.22  [Link to chromosome band 20q11]
Location_base_pair Starts at 34704344 and ends at 34713436 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HMGCR (5q13.3) / TP53INP2 (20q11.22)TP53INP2 (20q11.22) / ERGIC1 (5q35.1)TP53INP2 (20q11.22) / RPL34 (4q25)
TP53INP2 (20q11.22) / TP53INP2 (20q11.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TP53INP2   16104
Cards
Entrez_Gene (NCBI)TP53INP2    tumor protein p53 inducible nuclear protein 2
AliasesC20orf110; DOR; PIG-U; PIGU; 
PINH; dJ1181N3.1
GeneCards (Weizmann)TP53INP2
Ensembl hg19 (Hinxton)ENSG00000078804 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000078804 [Gene_View]  ENSG00000078804 [Sequence]  chr20:34704344-34713436 [Contig_View]  TP53INP2 [Vega]
ICGC DataPortalENSG00000078804
TCGA cBioPortalTP53INP2
AceView (NCBI)TP53INP2
Genatlas (Paris)TP53INP2
SOURCE (Princeton)TP53INP2
Genetics Home Reference (NIH)TP53INP2
Genomic and cartography
GoldenPath hg38 (UCSC)TP53INP2  -     chr20:34704344-34713436 +  20q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TP53INP2  -     20q11.22   [Description]    (hg19-Feb_2009)
GoldenPathTP53INP2 - 20q11.22 [CytoView hg19]  TP53INP2 - 20q11.22 [CytoView hg38]
ImmunoBaseENSG00000078804
Genome Data Viewer NCBITP53INP2 [Mapview hg19]  
OMIM617549   
Gene and transcription
Genbank (Entrez)AJ297792 AK025412 AK027153 AK292443 AL122050
RefSeq transcript (Entrez)NM_001329429 NM_001329430 NM_001329431 NM_021202
Consensus coding sequences : CCDS (NCBI)TP53INP2
Gene ExpressionTP53INP2 [ NCBI-GEO ]   TP53INP2 [ EBI - ARRAY_EXPRESS ]   TP53INP2 [ SEEK ]   TP53INP2 [ MEM ]
Gene Expression Viewer (FireBrowse)TP53INP2 [ Firebrowse - Broad ]
GenevisibleExpression of TP53INP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)58476
GTEX Portal (Tissue expression)TP53INP2
Human Protein AtlasENSG00000078804-TP53INP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IXH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IXH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IXH6
PhosPhoSitePlusQ8IXH6
Domains : Interpro (EBI)TP53INP    TP53INP2   
Domain families : Pfam (Sanger)DOR (PF14839)   
Domain families : Pfam (NCBI)pfam14839   
Conserved Domain (NCBI)TP53INP2
SuperfamilyQ8IXH6
AlphaFold pdb e-kbQ8IXH6   
Human Protein Atlas [tissue]ENSG00000078804-TP53INP2 [tissue]
HPRD15546
Protein Interaction databases
DIP (DOE-UCLA)Q8IXH6
IntAct (EBI)Q8IXH6
BioGRIDTP53INP2
STRING (EMBL)TP53INP2
ZODIACTP53INP2
Ontologies - Pathways
QuickGOQ8IXH6
Ontology : AmiGOautophagosome assembly  autophagosome assembly  osteoblast differentiation  tissue homeostasis  protein binding  nucleus  nucleus  autophagosome  autophagosome  cytosol  ubiquitin-dependent protein catabolic process  positive regulation of autophagy  PML body  cytoplasmic vesicle  ubiquitin binding  positive regulation of transcription, DNA-templated  positive regulation of transcription, DNA-templated  negative regulation of cellular protein localization  
Ontology : EGO-EBIautophagosome assembly  autophagosome assembly  osteoblast differentiation  tissue homeostasis  protein binding  nucleus  nucleus  autophagosome  autophagosome  cytosol  ubiquitin-dependent protein catabolic process  positive regulation of autophagy  PML body  cytoplasmic vesicle  ubiquitin binding  positive regulation of transcription, DNA-templated  positive regulation of transcription, DNA-templated  negative regulation of cellular protein localization  
NDEx NetworkTP53INP2
Atlas of Cancer Signalling NetworkTP53INP2
Wikipedia pathwaysTP53INP2
Orthology - Evolution
OrthoDB58476
GeneTree (enSembl)ENSG00000078804
Phylogenetic Trees/Animal Genes : TreeFamTP53INP2
Homologs : HomoloGeneTP53INP2
Homology/Alignments : Family Browser (UCSC)TP53INP2
Gene fusions - Rearrangements
Fusion : QuiverTP53INP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53INP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53INP2
dbVarTP53INP2
ClinVarTP53INP2
MonarchTP53INP2
1000_GenomesTP53INP2 
Exome Variant ServerTP53INP2
GNOMAD BrowserENSG00000078804
Varsome BrowserTP53INP2
ACMGTP53INP2 variants
VarityQ8IXH6
Genomic Variants (DGV)TP53INP2 [DGVbeta]
DECIPHERTP53INP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTP53INP2 
Mutations
ICGC Data PortalTP53INP2 
TCGA Data PortalTP53INP2 
Broad Tumor PortalTP53INP2
OASIS PortalTP53INP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTP53INP2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTP53INP2
Mutations and Diseases : HGMDTP53INP2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTP53INP2
DgiDB (Drug Gene Interaction Database)TP53INP2
DoCM (Curated mutations)TP53INP2
CIViC (Clinical Interpretations of Variants in Cancer)TP53INP2
Cancer3DTP53INP2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617549   
Orphanet
DisGeNETTP53INP2
MedgenTP53INP2
Genetic Testing Registry TP53INP2
NextProtQ8IXH6 [Medical]
GENETestsTP53INP2
Target ValidationTP53INP2
Huge Navigator TP53INP2 [HugePedia]
ClinGenTP53INP2
Clinical trials, drugs, therapy
MyCancerGenomeTP53INP2
Protein Interactions : CTDTP53INP2
Pharm GKB GenePA25650
PharosQ8IXH6
Clinical trialTP53INP2
Miscellaneous
canSAR (ICR)TP53INP2
HarmonizomeTP53INP2
DataMed IndexTP53INP2
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTP53INP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:35:58 CEST 2021

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