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TP53TG3 (TP53 target 3)

Identity

Alias_symbol (synonym)P53TG3
TP53TG3A
Other aliasTP53TG3E
TP53TG3F
HGNC (Hugo) TP53TG3
LocusID (NCBI) 24150
Atlas_Id 42674
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 33205583 and ends at 33208179 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TP53TG3   30759
Cards
Entrez_Gene (NCBI)TP53TG3  24150  TP53 target 3
AliasesP53TG3; TP53TG3A; TP53TG3E; TP53TG3F
GeneCards (Weizmann)TP53TG3
Ensembl hg19 (Hinxton)ENSG00000183632 [Gene_View]  chr16:33205583-33208179 [Contig_View]  TP53TG3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000183632 [Gene_View]  chr16:33205583-33208179 [Contig_View]  TP53TG3 [Vega]
ICGC DataPortalENSG00000183632
TCGA cBioPortalTP53TG3
AceView (NCBI)TP53TG3
Genatlas (Paris)TP53TG3
WikiGenes24150
SOURCE (Princeton)TP53TG3
Genetics Home Reference (NIH)TP53TG3
Genomic and cartography
GoldenPath hg19 (UCSC)TP53TG3  -     chr16:33205583-33208179 +  16p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TP53TG3  -     16p11.2   [Description]    (hg38-Dec_2013)
EnsemblTP53TG3 - 16p11.2 [CytoView hg19]  TP53TG3 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBITP53TG3 [Mapview hg19]  TP53TG3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023508 AK097435 AK312220 AL133588 BC096733
RefSeq transcript (Entrez)NM_001267813 NM_015369 NM_016212
RefSeq genomic (Entrez)NC_000016 NT_187260
Consensus coding sequences : CCDS (NCBI)TP53TG3
Cluster EST : UnigeneHs.706716 [ NCBI ]
CGAP (NCI)Hs.706716
Alternative Splicing GalleryENSG00000183632
Gene ExpressionTP53TG3 [ NCBI-GEO ]   TP53TG3 [ EBI - ARRAY_EXPRESS ]   TP53TG3 [ SEEK ]   TP53TG3 [ MEM ]
Gene Expression Viewer (FireBrowse)TP53TG3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)24150
GTEX Portal (Tissue expression)TP53TG3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULZ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULZ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULZ0
Splice isoforms : SwissVarQ9ULZ0
PhosPhoSitePlusQ9ULZ0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TP53TG3
DMDM Disease mutations24150
Blocks (Seattle)TP53TG3
SuperfamilyQ9ULZ0
Human Protein AtlasENSG00000183632
Peptide AtlasQ9ULZ0
HPRD18215
Protein Interaction databases
DIP (DOE-UCLA)Q9ULZ0
IntAct (EBI)Q9ULZ0
FunCoupENSG00000183632
BioGRIDTP53TG3
STRING (EMBL)TP53TG3
ZODIACTP53TG3
Ontologies - Pathways
QuickGOQ9ULZ0
Ontology : AmiGOnucleus  cytoplasm  
Ontology : EGO-EBInucleus  cytoplasm  
NDEx NetworkTP53TG3
Atlas of Cancer Signalling NetworkTP53TG3
Wikipedia pathwaysTP53TG3
Orthology - Evolution
OrthoDB24150
GeneTree (enSembl)ENSG00000183632
Phylogenetic Trees/Animal Genes : TreeFamTP53TG3
HOVERGENQ9ULZ0
HOGENOMQ9ULZ0
Homologs : HomoloGeneTP53TG3
Homology/Alignments : Family Browser (UCSC)TP53TG3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53TG3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53TG3
dbVarTP53TG3
ClinVarTP53TG3
1000_GenomesTP53TG3 
Exome Variant ServerTP53TG3
ExAC (Exome Aggregation Consortium)TP53TG3 (select the gene name)
Genetic variants : HAPMAP24150
Genomic Variants (DGV)TP53TG3 [DGVbeta]
DECIPHER (Syndromes)16:33205583-33208179  ENSG00000183632
CONAN: Copy Number AnalysisTP53TG3 
Mutations
ICGC Data PortalTP53TG3 
TCGA Data PortalTP53TG3 
Broad Tumor PortalTP53TG3
OASIS PortalTP53TG3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTP53TG3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTP53TG3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TP53TG3
DgiDB (Drug Gene Interaction Database)TP53TG3
DoCM (Curated mutations)TP53TG3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TP53TG3 (select a term)
intoGenTP53TG3
Cancer3DTP53TG3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTP53TG3
Genetic Testing Registry TP53TG3
NextProtQ9ULZ0 [Medical]
TSGene24150
GENETestsTP53TG3
Huge Navigator TP53TG3 [HugePedia]
snp3D : Map Gene to Disease24150
BioCentury BCIQTP53TG3
ClinGenTP53TG3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD24150
Chemical/Pharm GKB GenePA164726682
Clinical trialTP53TG3
Miscellaneous
canSAR (ICR)TP53TG3 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTP53TG3
EVEXTP53TG3
GoPubMedTP53TG3
iHOPTP53TG3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:23:09 CEST 2017

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