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TP53TG3C (TP53 target 3C)

Identity

Alias (NCBI)TP53TG3
TP53TG3E
TP53TG3F
HGNC (Hugo) TP53TG3C
LocusID (NCBI) 653550
Atlas_Id 75067
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 32674088 and ends at 32676127 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TP53TG3C   42962
Cards
Entrez_Gene (NCBI)TP53TG3C    TP53 target 3C
AliasesTP53TG3; TP53TG3E; TP53TG3F
GeneCards (Weizmann)TP53TG3C
Ensembl hg19 (Hinxton)ENSG00000205457 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205457 [Gene_View]  ENSG00000205457 [Sequence]  chr16:32674088-32676127 [Contig_View]  TP53TG3C [Vega]
ICGC DataPortalENSG00000205457
TCGA cBioPortalTP53TG3C
AceView (NCBI)TP53TG3C
Genatlas (Paris)TP53TG3C
SOURCE (Princeton)TP53TG3C
Genetics Home Reference (NIH)TP53TG3C
Genomic and cartography
GoldenPath hg38 (UCSC)TP53TG3C  -     chr16:32674088-32676127 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TP53TG3C  -     16p11.2   [Description]    (hg19-Feb_2009)
GoldenPathTP53TG3C - 16p11.2 [CytoView hg19]  TP53TG3C - 16p11.2 [CytoView hg38]
ImmunoBaseENSG00000205457
Genome Data Viewer NCBITP53TG3C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB023508 AK097435 AK312220 AL133588 BC096733
RefSeq transcript (Entrez)NM_001205259 NM_001205260
Consensus coding sequences : CCDS (NCBI)TP53TG3C
Gene ExpressionTP53TG3C [ NCBI-GEO ]   TP53TG3C [ EBI - ARRAY_EXPRESS ]   TP53TG3C [ SEEK ]   TP53TG3C [ MEM ]
Gene Expression Viewer (FireBrowse)TP53TG3C [ Firebrowse - Broad ]
GenevisibleExpression of TP53TG3C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)653550
GTEX Portal (Tissue expression)TP53TG3C
Human Protein AtlasENSG00000205457-TP53TG3C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULZ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULZ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULZ0
PhosPhoSitePlusQ9ULZ0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TP53TG3C
SuperfamilyQ9ULZ0
AlphaFold pdb e-kbQ9ULZ0   
Human Protein Atlas [tissue]ENSG00000205457-TP53TG3C [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9ULZ0
IntAct (EBI)Q9ULZ0
BioGRIDTP53TG3C
STRING (EMBL)TP53TG3C
ZODIACTP53TG3C
Ontologies - Pathways
QuickGOQ9ULZ0
Ontology : AmiGOnucleus  cytoplasm  
Ontology : EGO-EBInucleus  cytoplasm  
NDEx NetworkTP53TG3C
Atlas of Cancer Signalling NetworkTP53TG3C
Wikipedia pathwaysTP53TG3C
Orthology - Evolution
OrthoDB653550
GeneTree (enSembl)ENSG00000205457
Phylogenetic Trees/Animal Genes : TreeFamTP53TG3C
Homologs : HomoloGeneTP53TG3C
Homology/Alignments : Family Browser (UCSC)TP53TG3C
Gene fusions - Rearrangements
Fusion : QuiverTP53TG3C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53TG3C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53TG3C
dbVarTP53TG3C
ClinVarTP53TG3C
MonarchTP53TG3C
1000_GenomesTP53TG3C 
Exome Variant ServerTP53TG3C
GNOMAD BrowserENSG00000205457
Varsome BrowserTP53TG3C
ACMGTP53TG3C variants
VarityQ9ULZ0
Genomic Variants (DGV)TP53TG3C [DGVbeta]
DECIPHERTP53TG3C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTP53TG3C 
Mutations
ICGC Data PortalTP53TG3C 
TCGA Data PortalTP53TG3C 
Broad Tumor PortalTP53TG3C
OASIS PortalTP53TG3C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTP53TG3C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTP53TG3C
Mutations and Diseases : HGMDTP53TG3C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTP53TG3C
DgiDB (Drug Gene Interaction Database)TP53TG3C
DoCM (Curated mutations)TP53TG3C
CIViC (Clinical Interpretations of Variants in Cancer)TP53TG3C
Cancer3DTP53TG3C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTP53TG3C
MedgenTP53TG3C
Genetic Testing Registry TP53TG3C
NextProtQ9ULZ0 [Medical]
GENETestsTP53TG3C
Target ValidationTP53TG3C
Huge Navigator TP53TG3C [HugePedia]
ClinGenTP53TG3C
Clinical trials, drugs, therapy
MyCancerGenomeTP53TG3C
Protein Interactions : CTDTP53TG3C
Pharm GKB GenePA166049090
PharosQ9ULZ0
Clinical trialTP53TG3C
Miscellaneous
canSAR (ICR)TP53TG3C
HarmonizomeTP53TG3C
DataMed IndexTP53TG3C
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTP53TG3C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:35 CEST 2021

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