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TP53TG3D (TP53 target 3D)

Identity

Other aliasTP53TG3
TP53TG3B
TP53TG3C
TP53TG3E
TP53TG3F
HGNC (Hugo) TP53TG3D
LocusID (NCBI) 729264
Atlas_Id 75068
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 32253324 and ends at 32255928 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TP53TG3D   44657
Cards
Entrez_Gene (NCBI)TP53TG3D  729264  TP53 target 3D
AliasesTP53TG3; TP53TG3B; TP53TG3C; TP53TG3E; 
TP53TG3F
GeneCards (Weizmann)TP53TG3D
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:32253324-32255928 [Contig_View]  TP53TG3D [Vega]
TCGA cBioPortalTP53TG3D
AceView (NCBI)TP53TG3D
Genatlas (Paris)TP53TG3D
WikiGenes729264
SOURCE (Princeton)TP53TG3D
Genetics Home Reference (NIH)TP53TG3D
Genomic and cartography
GoldenPath hg38 (UCSC)TP53TG3D  -     chr16:32253324-32255928 +  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TP53TG3D  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblTP53TG3D - 16p11.2 [CytoView hg19]  TP53TG3D - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBITP53TG3D [Mapview hg19]  TP53TG3D [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023509 BC096700 BC099842 CR541650 DA077802
RefSeq transcript (Entrez)NM_001243722
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TP53TG3D
Cluster EST : UnigeneHs.513537 [ NCBI ]
CGAP (NCI)Hs.513537
Gene ExpressionTP53TG3D [ NCBI-GEO ]   TP53TG3D [ EBI - ARRAY_EXPRESS ]   TP53TG3D [ SEEK ]   TP53TG3D [ MEM ]
Gene Expression Viewer (FireBrowse)TP53TG3D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729264
GTEX Portal (Tissue expression)TP53TG3D
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULZ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULZ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULZ0
Splice isoforms : SwissVarQ9ULZ0
PhosPhoSitePlusQ9ULZ0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TP53TG3D
DMDM Disease mutations729264
Blocks (Seattle)TP53TG3D
SuperfamilyQ9ULZ0
Peptide AtlasQ9ULZ0
Protein Interaction databases
DIP (DOE-UCLA)Q9ULZ0
IntAct (EBI)Q9ULZ0
BioGRIDTP53TG3D
STRING (EMBL)TP53TG3D
ZODIACTP53TG3D
Ontologies - Pathways
QuickGOQ9ULZ0
Ontology : AmiGOnucleus  cytoplasm  
Ontology : EGO-EBInucleus  cytoplasm  
NDEx NetworkTP53TG3D
Atlas of Cancer Signalling NetworkTP53TG3D
Wikipedia pathwaysTP53TG3D
Orthology - Evolution
OrthoDB729264
Phylogenetic Trees/Animal Genes : TreeFamTP53TG3D
HOVERGENQ9ULZ0
HOGENOMQ9ULZ0
Homologs : HomoloGeneTP53TG3D
Homology/Alignments : Family Browser (UCSC)TP53TG3D
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53TG3D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53TG3D
dbVarTP53TG3D
ClinVarTP53TG3D
1000_GenomesTP53TG3D 
Exome Variant ServerTP53TG3D
ExAC (Exome Aggregation Consortium)TP53TG3D (select the gene name)
Genetic variants : HAPMAP729264
Genomic Variants (DGV)TP53TG3D [DGVbeta]
DECIPHERTP53TG3D [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTP53TG3D 
Mutations
ICGC Data PortalTP53TG3D 
TCGA Data PortalTP53TG3D 
Broad Tumor PortalTP53TG3D
OASIS PortalTP53TG3D [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTP53TG3D
BioMutasearch TP53TG3D
DgiDB (Drug Gene Interaction Database)TP53TG3D
DoCM (Curated mutations)TP53TG3D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TP53TG3D (select a term)
intoGenTP53TG3D
Cancer3DTP53TG3D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTP53TG3D
Genetic Testing Registry TP53TG3D
NextProtQ9ULZ0 [Medical]
TSGene729264
GENETestsTP53TG3D
Target ValidationTP53TG3D
Huge Navigator TP53TG3D [HugePedia]
snp3D : Map Gene to Disease729264
BioCentury BCIQTP53TG3D
ClinGenTP53TG3D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729264
Chemical/Pharm GKB GenePA166049150
Clinical trialTP53TG3D
Miscellaneous
canSAR (ICR)TP53TG3D (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTP53TG3D
EVEXTP53TG3D
GoPubMedTP53TG3D
iHOPTP53TG3D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:42:18 CEST 2017

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