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TP53TG3E (TP53 target 3 family member E)

Identity

Other alias-
HGNC (Hugo) TP53TG3E
LocusID (NCBI) 102724101
Atlas_Id 78718
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 33205602 and ends at 33208183 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TP53TG3E   51816
Cards
Entrez_Gene (NCBI)TP53TG3E  102724101  TP53 target 3 family member E
Aliases
GeneCards (Weizmann)TP53TG3E
Ensembl hg19 (Hinxton) [Gene_View]  chr16:33205602-33208183 [Contig_View]  TP53TG3E [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:33205602-33208183 [Contig_View]  TP53TG3E [Vega]
TCGA cBioPortalTP53TG3E
AceView (NCBI)TP53TG3E
Genatlas (Paris)TP53TG3E
WikiGenes102724101
SOURCE (Princeton)TP53TG3E
Genetics Home Reference (NIH)TP53TG3E
Genomic and cartography
GoldenPath hg19 (UCSC)TP53TG3E  -     chr16:33205602-33208183 +  16p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TP53TG3E  -     16p11.2   [Description]    (hg38-Dec_2013)
EnsemblTP53TG3E - 16p11.2 [CytoView hg19]  TP53TG3E - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBITP53TG3E [Mapview hg19]  TP53TG3E [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001330061
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TP53TG3E
Gene ExpressionTP53TG3E [ NCBI-GEO ]   TP53TG3E [ EBI - ARRAY_EXPRESS ]   TP53TG3E [ SEEK ]   TP53TG3E [ MEM ]
Gene Expression Viewer (FireBrowse)TP53TG3E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724101
GTEX Portal (Tissue expression)TP53TG3E
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULZ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULZ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULZ0
Splice isoforms : SwissVarQ9ULZ0
PhosPhoSitePlusQ9ULZ0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TP53TG3E
DMDM Disease mutations102724101
Blocks (Seattle)TP53TG3E
SuperfamilyQ9ULZ0
Peptide AtlasQ9ULZ0
Protein Interaction databases
DIP (DOE-UCLA)Q9ULZ0
IntAct (EBI)Q9ULZ0
BioGRIDTP53TG3E
STRING (EMBL)TP53TG3E
ZODIACTP53TG3E
Ontologies - Pathways
QuickGOQ9ULZ0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTP53TG3E
Atlas of Cancer Signalling NetworkTP53TG3E
Wikipedia pathwaysTP53TG3E
Orthology - Evolution
OrthoDB102724101
Phylogenetic Trees/Animal Genes : TreeFamTP53TG3E
HOVERGENQ9ULZ0
HOGENOMQ9ULZ0
Homologs : HomoloGeneTP53TG3E
Homology/Alignments : Family Browser (UCSC)TP53TG3E
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53TG3E [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53TG3E
dbVarTP53TG3E
ClinVarTP53TG3E
1000_GenomesTP53TG3E 
Exome Variant ServerTP53TG3E
ExAC (Exome Aggregation Consortium)TP53TG3E (select the gene name)
Genetic variants : HAPMAP102724101
Genomic Variants (DGV)TP53TG3E [DGVbeta]
DECIPHER (Syndromes)16:33205602-33208183  
CONAN: Copy Number AnalysisTP53TG3E 
Mutations
ICGC Data PortalTP53TG3E 
TCGA Data PortalTP53TG3E 
Broad Tumor PortalTP53TG3E
OASIS PortalTP53TG3E [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTP53TG3E
BioMutasearch TP53TG3E
DgiDB (Drug Gene Interaction Database)TP53TG3E
DoCM (Curated mutations)TP53TG3E (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TP53TG3E (select a term)
intoGenTP53TG3E
Cancer3DTP53TG3E(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTP53TG3E
Genetic Testing Registry TP53TG3E
NextProtQ9ULZ0 [Medical]
TSGene102724101
GENETestsTP53TG3E
Huge Navigator TP53TG3E [HugePedia]
snp3D : Map Gene to Disease102724101
BioCentury BCIQTP53TG3E
ClinGenTP53TG3E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724101
Clinical trialTP53TG3E
Miscellaneous
canSAR (ICR)TP53TG3E (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTP53TG3E
EVEXTP53TG3E
GoPubMedTP53TG3E
iHOPTP53TG3E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:49:22 CET 2017

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