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TP53TG3F (TP53 target 3 family member F)

Identity

Other alias-
HGNC (Hugo) TP53TG3F
LocusID (NCBI) 102724127
Atlas_Id 78783
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 33205603 and ends at 33208179 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TP53TG3F   51817
Cards
Entrez_Gene (NCBI)TP53TG3F  102724127  TP53 target 3 family member F
Aliases
GeneCards (Weizmann)TP53TG3F
Ensembl hg19 (Hinxton) [Gene_View]  chr16:33205603-33208179 [Contig_View]  TP53TG3F [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:33205603-33208179 [Contig_View]  TP53TG3F [Vega]
TCGA cBioPortalTP53TG3F
AceView (NCBI)TP53TG3F
Genatlas (Paris)TP53TG3F
WikiGenes102724127
SOURCE (Princeton)TP53TG3F
Genetics Home Reference (NIH)TP53TG3F
Genomic and cartography
GoldenPath hg19 (UCSC)TP53TG3F  -     chr16:33205603-33208179 +  16p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TP53TG3F  -     16p11.2   [Description]    (hg38-Dec_2013)
EnsemblTP53TG3F - 16p11.2 [CytoView hg19]  TP53TG3F - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBITP53TG3F [Mapview hg19]  TP53TG3F [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001330066
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TP53TG3F
Gene ExpressionTP53TG3F [ NCBI-GEO ]   TP53TG3F [ EBI - ARRAY_EXPRESS ]   TP53TG3F [ SEEK ]   TP53TG3F [ MEM ]
Gene Expression Viewer (FireBrowse)TP53TG3F [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102724127
GTEX Portal (Tissue expression)TP53TG3F
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9ULZ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9ULZ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9ULZ0
Splice isoforms : SwissVarQ9ULZ0
PhosPhoSitePlusQ9ULZ0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TP53TG3F
DMDM Disease mutations102724127
Blocks (Seattle)TP53TG3F
SuperfamilyQ9ULZ0
Peptide AtlasQ9ULZ0
Protein Interaction databases
DIP (DOE-UCLA)Q9ULZ0
IntAct (EBI)Q9ULZ0
BioGRIDTP53TG3F
STRING (EMBL)TP53TG3F
ZODIACTP53TG3F
Ontologies - Pathways
QuickGOQ9ULZ0
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTP53TG3F
Atlas of Cancer Signalling NetworkTP53TG3F
Wikipedia pathwaysTP53TG3F
Orthology - Evolution
OrthoDB102724127
Phylogenetic Trees/Animal Genes : TreeFamTP53TG3F
HOVERGENQ9ULZ0
HOGENOMQ9ULZ0
Homologs : HomoloGeneTP53TG3F
Homology/Alignments : Family Browser (UCSC)TP53TG3F
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTP53TG3F [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TP53TG3F
dbVarTP53TG3F
ClinVarTP53TG3F
1000_GenomesTP53TG3F 
Exome Variant ServerTP53TG3F
ExAC (Exome Aggregation Consortium)TP53TG3F (select the gene name)
Genetic variants : HAPMAP102724127
Genomic Variants (DGV)TP53TG3F [DGVbeta]
DECIPHER (Syndromes)16:33205603-33208179  
CONAN: Copy Number AnalysisTP53TG3F 
Mutations
ICGC Data PortalTP53TG3F 
TCGA Data PortalTP53TG3F 
Broad Tumor PortalTP53TG3F
OASIS PortalTP53TG3F [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTP53TG3F
BioMutasearch TP53TG3F
DgiDB (Drug Gene Interaction Database)TP53TG3F
DoCM (Curated mutations)TP53TG3F (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TP53TG3F (select a term)
intoGenTP53TG3F
Cancer3DTP53TG3F(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTP53TG3F
Genetic Testing Registry TP53TG3F
NextProtQ9ULZ0 [Medical]
TSGene102724127
GENETestsTP53TG3F
Huge Navigator TP53TG3F [HugePedia]
snp3D : Map Gene to Disease102724127
BioCentury BCIQTP53TG3F
ClinGenTP53TG3F
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102724127
Clinical trialTP53TG3F
Miscellaneous
canSAR (ICR)TP53TG3F (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTP53TG3F
EVEXTP53TG3F
GoPubMedTP53TG3F
iHOPTP53TG3F
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:49:22 CET 2017

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