Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TPM1-AS (TPM1 antisense RNA)


Alias (NCBI)TPM1-AS1
HGNC Alias symbTPM1-AS1
HGNC Alias nameTPM1 antisense RNA 1
LocusID (NCBI) 111064646
Atlas_Id 78891
Location 15q22.2  [Link to chromosome band 15q22]
Location_base_pair Starts at 63046034 and ends at 63049387 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)TPM1-AS   53635
Entrez_Gene (NCBI)TPM1-AS    TPM1 antisense RNA
GeneCards (Weizmann)TPM1-AS
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr15:63046034-63049387 [Contig_View]  TPM1-AS [Vega]
TCGA cBioPortalTPM1-AS
Genatlas (Paris)TPM1-AS
SOURCE (Princeton)TPM1-AS
Genetics Home Reference (NIH)TPM1-AS
Genomic and cartography
GoldenPath hg38 (UCSC)TPM1-AS  -     chr15:63046034-63049387 -  15q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPM1-AS  -     15q22.2   [Description]    (hg19-Feb_2009)
GoldenPathTPM1-AS - 15q22.2 [CytoView hg19]  TPM1-AS - 15q22.2 [CytoView hg38]
Genome Data Viewer NCBITPM1-AS [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK092594 AK310237 DA927784
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TPM1-AS
Gene ExpressionTPM1-AS [ NCBI-GEO ]   TPM1-AS [ EBI - ARRAY_EXPRESS ]   TPM1-AS [ SEEK ]   TPM1-AS [ MEM ]
Gene Expression Viewer (FireBrowse)TPM1-AS [ Firebrowse - Broad ]
GenevisibleExpression of TPM1-AS in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)111064646
GTEX Portal (Tissue expression)TPM1-AS
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPM1-AS
Protein Interaction databases
Ontologies - Pathways
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:37 CEST 2021

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