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TPMT (thiopurine S-methyltransferase)

Identity

Alias (NCBI)TPMTD
HGNC (Hugo) TPMT
LocusID (NCBI) 7172
Atlas_Id 42680
Location 6p22.3  [Link to chromosome band 6p22]
Location_base_pair Starts at 18128314 and ends at 18155169 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KIF13A (6p22.3) / TPMT (6p22.3)NF1 (17q11.2) / TPMT (6p22.3)RANBP9 (6p23) / TPMT (6p22.3)
TPMT (6p22.3) / PHACTR2 (6q24.2)KIF13A 6p22.3 / TPMT 6p22.3NF1 17q11.2 / TPMT 6p22.3
RANBP9 6p23 / TPMT 6p22.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TPMT   12014
LRG (Locus Reference Genomic)LRG_874
Cards
Entrez_Gene (NCBI)TPMT    thiopurine S-methyltransferase
AliasesTPMTD
GeneCards (Weizmann)TPMT
Ensembl hg19 (Hinxton)ENSG00000137364 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137364 [Gene_View]  ENSG00000137364 [Sequence]  chr6:18128314-18155169 [Contig_View]  TPMT [Vega]
ICGC DataPortalENSG00000137364
TCGA cBioPortalTPMT
AceView (NCBI)TPMT
Genatlas (Paris)TPMT
SOURCE (Princeton)TPMT
Genetics Home Reference (NIH)TPMT
Genomic and cartography
GoldenPath hg38 (UCSC)TPMT  -     chr6:18128314-18155169 -  6p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPMT  -     6p22.3   [Description]    (hg19-Feb_2009)
GoldenPathTPMT - 6p22.3 [CytoView hg19]  TPMT - 6p22.3 [CytoView hg38]
ImmunoBaseENSG00000137364
Genome Data Viewer NCBITPMT [Mapview hg19]  
OMIM187680   610460   
Gene and transcription
Genbank (Entrez)AA746081 AA825975 AF021876 AF021877 AK310420
RefSeq transcript (Entrez)NM_000367 NM_001346817 NM_001346818
Consensus coding sequences : CCDS (NCBI)TPMT
Gene ExpressionTPMT [ NCBI-GEO ]   TPMT [ EBI - ARRAY_EXPRESS ]   TPMT [ SEEK ]   TPMT [ MEM ]
Gene Expression Viewer (FireBrowse)TPMT [ Firebrowse - Broad ]
GenevisibleExpression of TPMT in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7172
GTEX Portal (Tissue expression)TPMT
Human Protein AtlasENSG00000137364-TPMT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPMT
Human Protein Atlas [tissue]ENSG00000137364-TPMT [tissue]
HPRD01760
Protein Interaction databases
BioGRIDTPMT
STRING (EMBL)TPMT
ZODIACTPMT
Ontologies - Pathways
Litterature
PubMed294 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTPMT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:36:01 CEST 2021

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