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TPPP2 (tubulin polymerization-promoting protein family member 2)

Identity

Alias_namesC14orf8
chromosome 14 open reading frame 8
Alias_symbol (synonym)p25beta
p18
CT152
Other aliasP18
HGNC (Hugo) TPPP2
LocusID (NCBI) 122664
Atlas_Id 75078
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21498345 and ends at 21500332 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TPPP2   19293
Cards
Entrez_Gene (NCBI)TPPP2  122664  tubulin polymerization-promoting protein family member 2
AliasesC14orf8; CT152; P18; p25beta
GeneCards (Weizmann)TPPP2
Ensembl hg19 (Hinxton)ENSG00000179636 [Gene_View]  chr14:21498345-21500332 [Contig_View]  TPPP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000179636 [Gene_View]  chr14:21498345-21500332 [Contig_View]  TPPP2 [Vega]
ICGC DataPortalENSG00000179636
TCGA cBioPortalTPPP2
AceView (NCBI)TPPP2
Genatlas (Paris)TPPP2
WikiGenes122664
SOURCE (Princeton)TPPP2
Genetics Home Reference (NIH)TPPP2
Genomic and cartography
GoldenPath hg19 (UCSC)TPPP2  -     chr14:21498345-21500332 +  14q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TPPP2  -     14q11.2   [Description]    (hg38-Dec_2013)
EnsemblTPPP2 - 14q11.2 [CytoView hg19]  TPPP2 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBITPPP2 [Mapview hg19]  TPPP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093070 AK098680 AW135537 AY072034 AY173946
RefSeq transcript (Entrez)NM_173846
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)TPPP2
Cluster EST : UnigeneHs.406966 [ NCBI ]
CGAP (NCI)Hs.406966
Alternative Splicing GalleryENSG00000179636
Gene ExpressionTPPP2 [ NCBI-GEO ]   TPPP2 [ EBI - ARRAY_EXPRESS ]   TPPP2 [ SEEK ]   TPPP2 [ MEM ]
Gene Expression Viewer (FireBrowse)TPPP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)122664
GTEX Portal (Tissue expression)TPPP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59282   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59282  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59282
Splice isoforms : SwissVarP59282
PhosPhoSitePlusP59282
Domains : Interpro (EBI)P25-alpha    TPPP2   
Domain families : Pfam (Sanger)p25-alpha (PF05517)   
Domain families : Pfam (NCBI)pfam05517   
Conserved Domain (NCBI)TPPP2
DMDM Disease mutations122664
Blocks (Seattle)TPPP2
SuperfamilyP59282
Human Protein AtlasENSG00000179636
Peptide AtlasP59282
HPRD12657
IPIIPI00184564   IPI00964241   IPI00963905   IPI00966341   
Protein Interaction databases
DIP (DOE-UCLA)P59282
IntAct (EBI)P59282
FunCoupENSG00000179636
BioGRIDTPPP2
STRING (EMBL)TPPP2
ZODIACTPPP2
Ontologies - Pathways
QuickGOP59282
Ontology : AmiGOcytoplasm  
Ontology : EGO-EBIcytoplasm  
NDEx NetworkTPPP2
Atlas of Cancer Signalling NetworkTPPP2
Wikipedia pathwaysTPPP2
Orthology - Evolution
OrthoDB122664
GeneTree (enSembl)ENSG00000179636
Phylogenetic Trees/Animal Genes : TreeFamTPPP2
HOVERGENP59282
HOGENOMP59282
Homologs : HomoloGeneTPPP2
Homology/Alignments : Family Browser (UCSC)TPPP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTPPP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TPPP2
dbVarTPPP2
ClinVarTPPP2
1000_GenomesTPPP2 
Exome Variant ServerTPPP2
ExAC (Exome Aggregation Consortium)TPPP2 (select the gene name)
Genetic variants : HAPMAP122664
Genomic Variants (DGV)TPPP2 [DGVbeta]
DECIPHER (Syndromes)14:21498345-21500332  ENSG00000179636
CONAN: Copy Number AnalysisTPPP2 
Mutations
ICGC Data PortalTPPP2 
TCGA Data PortalTPPP2 
Broad Tumor PortalTPPP2
OASIS PortalTPPP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTPPP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTPPP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TPPP2
DgiDB (Drug Gene Interaction Database)TPPP2
DoCM (Curated mutations)TPPP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TPPP2 (select a term)
intoGenTPPP2
Cancer3DTPPP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTPPP2
Genetic Testing Registry TPPP2
NextProtP59282 [Medical]
TSGene122664
GENETestsTPPP2
Huge Navigator TPPP2 [HugePedia]
snp3D : Map Gene to Disease122664
BioCentury BCIQTPPP2
ClinGenTPPP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD122664
Chemical/Pharm GKB GenePA162406822
Clinical trialTPPP2
Miscellaneous
canSAR (ICR)TPPP2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPPP2
EVEXTPPP2
GoPubMedTPPP2
iHOPTPPP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:49:24 CET 2017

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