Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TPRG1-AS1 (TPRG1 antisense RNA 1)

Identity

Alias_namesTPRG1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) TPRG1-AS1
LocusID (NCBI) 100874043
Atlas_Id 75080
Location 3q28  [Link to chromosome band 3q28]
Location_base_pair Starts at 188659504 and ends at 188665428 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TPRG1-AS1   42391
Cards
Entrez_Gene (NCBI)TPRG1-AS1  100874043  TPRG1 antisense RNA 1
Aliases
GeneCards (Weizmann)TPRG1-AS1
Ensembl hg19 (Hinxton)ENSG00000234076 [Gene_View]  chr3:188659504-188665428 [Contig_View]  TPRG1-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000234076 [Gene_View]  chr3:188659504-188665428 [Contig_View]  TPRG1-AS1 [Vega]
ICGC DataPortalENSG00000234076
TCGA cBioPortalTPRG1-AS1
AceView (NCBI)TPRG1-AS1
Genatlas (Paris)TPRG1-AS1
WikiGenes100874043
SOURCE (Princeton)TPRG1-AS1
Genetics Home Reference (NIH)TPRG1-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)TPRG1-AS1  -     chr3:188659504-188665428 -  3q28   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TPRG1-AS1  -     3q28   [Description]    (hg38-Dec_2013)
EnsemblTPRG1-AS1 - 3q28 [CytoView hg19]  TPRG1-AS1 - 3q28 [CytoView hg38]
Mapping of homologs : NCBITPRG1-AS1 [Mapview hg19]  TPRG1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG778254 HG496487
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)TPRG1-AS1
Cluster EST : UnigeneHs.616287 [ NCBI ]
CGAP (NCI)Hs.616287
Alternative Splicing GalleryENSG00000234076
Gene ExpressionTPRG1-AS1 [ NCBI-GEO ]   TPRG1-AS1 [ EBI - ARRAY_EXPRESS ]   TPRG1-AS1 [ SEEK ]   TPRG1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TPRG1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874043
GTEX Portal (Tissue expression)TPRG1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPRG1-AS1
DMDM Disease mutations100874043
Blocks (Seattle)TPRG1-AS1
Human Protein AtlasENSG00000234076
Protein Interaction databases
FunCoupENSG00000234076
BioGRIDTPRG1-AS1
STRING (EMBL)TPRG1-AS1
ZODIACTPRG1-AS1
Ontologies - Pathways
Huge Navigator TPRG1-AS1 [HugePedia]
snp3D : Map Gene to Disease100874043
BioCentury BCIQTPRG1-AS1
ClinGenTPRG1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874043
Clinical trialTPRG1-AS1
Miscellaneous
canSAR (ICR)TPRG1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPRG1-AS1
EVEXTPRG1-AS1
GoPubMedTPRG1-AS1
iHOPTPRG1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:49:25 CET 2017

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