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TPTE2P1 (transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1)

Identity

Alias (NCBI)-
HGNC (Hugo) TPTE2P1
LocusID (NCBI) 646405
Atlas_Id 75090
Location 13q12.13  [Link to chromosome band 13q12]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TPTE2P1   35196
Cards
Entrez_Gene (NCBI)TPTE2P1    transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
Aliases
GeneCards (Weizmann)TPTE2P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  TPTE2P1 [Vega]
TCGA cBioPortalTPTE2P1
AceView (NCBI)TPTE2P1
Genatlas (Paris)TPTE2P1
SOURCE (Princeton)TPTE2P1
Genetics Home Reference (NIH)TPTE2P1
Genomic and cartography
GoldenPath hg38 (UCSC)TPTE2P1  -  
GoldenPath hg19 (UCSC)TPTE2P1  -  
GoldenPathTPTE2P1 - [CytoView hg19]  TPTE2P1 - [CytoView hg38]
Genome Data Viewer NCBITPTE2P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK094224 AK126328 AK297470 OA986248 OA986249
RefSeq transcript (Entrez)NM_001126062
Consensus coding sequences : CCDS (NCBI)TPTE2P1
Gene ExpressionTPTE2P1 [ NCBI-GEO ]   TPTE2P1 [ EBI - ARRAY_EXPRESS ]   TPTE2P1 [ SEEK ]   TPTE2P1 [ MEM ]
Gene Expression Viewer (FireBrowse)TPTE2P1 [ Firebrowse - Broad ]
GenevisibleExpression of TPTE2P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646405
GTEX Portal (Tissue expression)TPTE2P1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T6R2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T6R2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T6R2
PhosPhoSitePlusQ5T6R2
Domaine pattern : Prosite (Expaxy)C2_TENSIN (PS51182)   
Domains : Interpro (EBI)Tensin_C2-dom   
Domain families : Pfam (Sanger)PTEN_C2 (PF10409)   
Domain families : Pfam (NCBI)pfam10409   
Conserved Domain (NCBI)TPTE2P1
SuperfamilyQ5T6R2
AlphaFold pdb e-kbQ5T6R2   
Protein Interaction databases
DIP (DOE-UCLA)Q5T6R2
IntAct (EBI)Q5T6R2
BioGRIDTPTE2P1
STRING (EMBL)TPTE2P1
ZODIACTPTE2P1
Ontologies - Pathways
QuickGOQ5T6R2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkTPTE2P1
Atlas of Cancer Signalling NetworkTPTE2P1
Wikipedia pathwaysTPTE2P1
Orthology - Evolution
OrthoDB646405
Phylogenetic Trees/Animal Genes : TreeFamTPTE2P1
Homologs : HomoloGeneTPTE2P1
Homology/Alignments : Family Browser (UCSC)TPTE2P1
Gene fusions - Rearrangements
Fusion : QuiverTPTE2P1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTPTE2P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TPTE2P1
dbVarTPTE2P1
ClinVarTPTE2P1
MonarchTPTE2P1
1000_GenomesTPTE2P1 
Exome Variant ServerTPTE2P1
Varsome BrowserTPTE2P1
ACMGTPTE2P1 variants
VarityQ5T6R2
Genomic Variants (DGV)TPTE2P1 [DGVbeta]
DECIPHERTPTE2P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTPTE2P1 
Mutations
ICGC Data PortalTPTE2P1 
TCGA Data PortalTPTE2P1 
Broad Tumor PortalTPTE2P1
OASIS PortalTPTE2P1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTPTE2P1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTPTE2P1
DgiDB (Drug Gene Interaction Database)TPTE2P1
DoCM (Curated mutations)TPTE2P1
CIViC (Clinical Interpretations of Variants in Cancer)TPTE2P1
Cancer3DTPTE2P1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTPTE2P1
MedgenTPTE2P1
Genetic Testing Registry TPTE2P1
NextProtQ5T6R2 [Medical]
GENETestsTPTE2P1
Target ValidationTPTE2P1
Huge Navigator TPTE2P1 [HugePedia]
ClinGenTPTE2P1
Clinical trials, drugs, therapy
MyCancerGenomeTPTE2P1
Protein Interactions : CTDTPTE2P1
Pharm GKB GenePA164726706
PharosQ5T6R2
Clinical trialTPTE2P1
Miscellaneous
canSAR (ICR)TPTE2P1
HarmonizomeTPTE2P1
DataMed IndexTPTE2P1
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTPTE2P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:39 CEST 2021

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