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TPTE2P5 (transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5)

Identity

Other alias-
HGNC (Hugo) TPTE2P5
LocusID (NCBI) 100616668
Atlas_Id 75093
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 40796986 and ends at 40921750 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TPTE2P5   42356
Cards
Entrez_Gene (NCBI)TPTE2P5  100616668  transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 5
Aliases
GeneCards (Weizmann)TPTE2P5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:40796986-40921750 [Contig_View]  TPTE2P5 [Vega]
TCGA cBioPortalTPTE2P5
AceView (NCBI)TPTE2P5
Genatlas (Paris)TPTE2P5
WikiGenes100616668
SOURCE (Princeton)TPTE2P5
Genetics Home Reference (NIH)TPTE2P5
Genomic and cartography
GoldenPath hg38 (UCSC)TPTE2P5  -     chr13:40796986-40921750 -  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPTE2P5  -     13q14.11   [Description]    (hg19-Feb_2009)
EnsemblTPTE2P5 - 13q14.11 [CytoView hg19]  TPTE2P5 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBITPTE2P5 [Mapview hg19]  TPTE2P5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093232 AK096993 AW137230 BC047078 DA313168
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TPTE2P5
Cluster EST : UnigeneHs.660718 [ NCBI ]
CGAP (NCI)Hs.660718
Gene ExpressionTPTE2P5 [ NCBI-GEO ]   TPTE2P5 [ EBI - ARRAY_EXPRESS ]   TPTE2P5 [ SEEK ]   TPTE2P5 [ MEM ]
Gene Expression Viewer (FireBrowse)TPTE2P5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616668
GTEX Portal (Tissue expression)TPTE2P5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPTE2P5
DMDM Disease mutations100616668
Blocks (Seattle)TPTE2P5
Protein Interaction databases
BioGRIDTPTE2P5
STRING (EMBL)TPTE2P5
ZODIACTPTE2P5
Ontologies - Pathways
Huge Navigator TPTE2P5 [HugePedia]
snp3D : Map Gene to Disease100616668
BioCentury BCIQTPTE2P5
ClinGenTPTE2P5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616668
Clinical trialTPTE2P5
Miscellaneous
canSAR (ICR)TPTE2P5 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPTE2P5
EVEXTPTE2P5
GoPubMedTPTE2P5
iHOPTPTE2P5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:29:05 CET 2017

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