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TPTE2P6 (transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6)

Identity

Other alias-
HGNC (Hugo) TPTE2P6
LocusID (NCBI) 374491
Atlas_Id 75094
Location 13q12.12  [Link to chromosome band 13q12]
Location_base_pair Starts at 24580208 and ends at 24597674 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TPTE2P6   42644
Cards
Entrez_Gene (NCBI)TPTE2P6  374491  transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 6
Aliases
GeneCards (Weizmann)TPTE2P6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:24580208-24597674 [Contig_View]  TPTE2P6 [Vega]
TCGA cBioPortalTPTE2P6
AceView (NCBI)TPTE2P6
Genatlas (Paris)TPTE2P6
WikiGenes374491
SOURCE (Princeton)TPTE2P6
Genetics Home Reference (NIH)TPTE2P6
Genomic and cartography
GoldenPath hg38 (UCSC)TPTE2P6  -     chr13:24580208-24597674 +  13q12.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPTE2P6  -     13q12.12   [Description]    (hg19-Feb_2009)
EnsemblTPTE2P6 - 13q12.12 [CytoView hg19]  TPTE2P6 - 13q12.12 [CytoView hg38]
Mapping of homologs : NCBITPTE2P6 [Mapview hg19]  TPTE2P6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL122103 AL137411 BC045761 DN831683
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TPTE2P6
Cluster EST : UnigeneHs.406779 [ NCBI ]
CGAP (NCI)Hs.406779
Gene ExpressionTPTE2P6 [ NCBI-GEO ]   TPTE2P6 [ EBI - ARRAY_EXPRESS ]   TPTE2P6 [ SEEK ]   TPTE2P6 [ MEM ]
Gene Expression Viewer (FireBrowse)TPTE2P6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)374491
GTEX Portal (Tissue expression)TPTE2P6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPTE2P6
DMDM Disease mutations374491
Blocks (Seattle)TPTE2P6
IPIIPI00746132   
Protein Interaction databases
BioGRIDTPTE2P6
STRING (EMBL)TPTE2P6
ZODIACTPTE2P6
Ontologies - Pathways
Huge Navigator TPTE2P6 [HugePedia]
snp3D : Map Gene to Disease374491
BioCentury BCIQTPTE2P6
ClinGenTPTE2P6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374491
Clinical trialTPTE2P6
Miscellaneous
canSAR (ICR)TPTE2P6 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPTE2P6
EVEXTPTE2P6
GoPubMedTPTE2P6
iHOPTPTE2P6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:33:43 CET 2017

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