Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TPTEP2 (TPTE pseudogene 2)

Identity

Alias (NCBI)Z98749.2
HGNC (Hugo) TPTEP2
LocusID (NCBI) 400927
Atlas_Id 80448
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38344665 and ends at 38398926 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)TPTEP2   53828
Cards
Entrez_Gene (NCBI)TPTEP2    TPTE pseudogene 2
AliasesZ98749.2
GeneCards (Weizmann)TPTEP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr22:38344665-38398926 [Contig_View]  TPTEP2 [Vega]
TCGA cBioPortalTPTEP2
AceView (NCBI)TPTEP2
Genatlas (Paris)TPTEP2
SOURCE (Princeton)TPTEP2
Genetics Home Reference (NIH)TPTEP2
Genomic and cartography
GoldenPath hg38 (UCSC)TPTEP2  -     chr22:38344665-38398926 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPTEP2  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathTPTEP2 - 22q13.1 [CytoView hg19]  TPTEP2 - 22q13.1 [CytoView hg38]
Genome Data Viewer NCBITPTEP2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK124064 AK307225 BI669165 CN357790
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TPTEP2
Gene ExpressionTPTEP2 [ NCBI-GEO ]   TPTEP2 [ EBI - ARRAY_EXPRESS ]   TPTEP2 [ SEEK ]   TPTEP2 [ MEM ]
Gene Expression Viewer (FireBrowse)TPTEP2 [ Firebrowse - Broad ]
GenevisibleExpression of TPTEP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400927
GTEX Portal (Tissue expression)TPTEP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPTEP2
Protein Interaction databases
BioGRIDTPTEP2
STRING (EMBL)TPTEP2
ZODIACTPTEP2
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTPTEP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:40 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.