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TRAF3IP2 (TRAF3 interacting protein 2)

Identity

Alias (NCBI)ACT1
C6orf2
C6orf4
C6orf5
C6orf6
CANDF8
CIKS
PSORS13
HGNC (Hugo) TRAF3IP2
HGNC Alias symbDKFZP586G0522
ACT1
CIKS
HGNC Previous nameC6orf4
 C6orf5
 C6orf6
 C6orf2
HGNC Previous namechromosome 6 open reading frame 5
 chromosome 6 open reading frame 2
LocusID (NCBI) 10758
Atlas_Id 891
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 111555381 and ends at 111605878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TRAF3IP2 (6q21) / KIAA1324 (1p13.3)TRAF3IP2 6q21 / KIAA1324 1p13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TRAF3IP2   1343
Cards
Entrez_Gene (NCBI)TRAF3IP2    TRAF3 interacting protein 2
AliasesACT1; C6orf2; C6orf4; C6orf5; 
C6orf6; CANDF8; CIKS; PSORS13
GeneCards (Weizmann)TRAF3IP2
Ensembl hg19 (Hinxton)ENSG00000056972 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000056972 [Gene_View]  ENSG00000056972 [Sequence]  chr6:111555381-111605878 [Contig_View]  TRAF3IP2 [Vega]
ICGC DataPortalENSG00000056972
TCGA cBioPortalTRAF3IP2
AceView (NCBI)TRAF3IP2
Genatlas (Paris)TRAF3IP2
SOURCE (Princeton)TRAF3IP2
Genetics Home Reference (NIH)TRAF3IP2
Genomic and cartography
GoldenPath hg38 (UCSC)TRAF3IP2  -     chr6:111555381-111605878 -  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRAF3IP2  -     6q21   [Description]    (hg19-Feb_2009)
GoldenPathTRAF3IP2 - 6q21 [CytoView hg19]  TRAF3IP2 - 6q21 [CytoView hg38]
ImmunoBaseENSG00000056972
genome Data Viewer NCBITRAF3IP2 [Mapview hg19]  
OMIM607043   614070   615527   
Gene and transcription
Genbank (Entrez)AF085921 AF136405 AF136406 AF136407 AF272151
RefSeq transcript (Entrez)NM_001164281 NM_001164282 NM_001164283 NM_147200 NM_147686
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRAF3IP2
Alternative Splicing GalleryENSG00000056972
Gene ExpressionTRAF3IP2 [ NCBI-GEO ]   TRAF3IP2 [ EBI - ARRAY_EXPRESS ]   TRAF3IP2 [ SEEK ]   TRAF3IP2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRAF3IP2 [ Firebrowse - Broad ]
GenevisibleExpression of TRAF3IP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10758
GTEX Portal (Tissue expression)TRAF3IP2
Human Protein AtlasENSG00000056972-TRAF3IP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRAF3IP2
Blocks (Seattle)TRAF3IP2
Human Protein Atlas [tissue]ENSG00000056972-TRAF3IP2 [tissue]
HPRD06129
IPIIPI00013883   IPI00170492   IPI00647288   IPI00478211   IPI00644010   
Protein Interaction databases
BioGRIDTRAF3IP2
STRING (EMBL)TRAF3IP2
ZODIACTRAF3IP2
Ontologies - Pathways
Litterature
PubMed76 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRAF3IP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:50:41 CET 2021

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