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TRAJ17 (T cell receptor alpha joining 17)

Identity

Other alias-
HGNC (Hugo) TRAJ17
LocusID (NCBI) 28738
Atlas_Id 75102
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21723713 and ends at 22552154 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRAJ17   12045
Cards
Entrez_Gene (NCBI)TRAJ17  28738  T cell receptor alpha joining 17
Aliases
GeneCards (Weizmann)TRAJ17
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:21723713-22552154 [Contig_View]  TRAJ17 [Vega]
TCGA cBioPortalTRAJ17
AceView (NCBI)TRAJ17
Genatlas (Paris)TRAJ17
WikiGenes28738
SOURCE (Princeton)TRAJ17
Genetics Home Reference (NIH)TRAJ17
Genomic and cartography
GoldenPath hg38 (UCSC)TRAJ17  -     chr14:21723713-22552154 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRAJ17  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblTRAJ17 - 14q11.2 [CytoView hg19]  TRAJ17 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBITRAJ17 [Mapview hg19]  TRAJ17 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035680
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRAJ17
Cluster EST : UnigeneHs.74647 [ NCBI ]
CGAP (NCI)Hs.74647
Gene ExpressionTRAJ17 [ NCBI-GEO ]   TRAJ17 [ EBI - ARRAY_EXPRESS ]   TRAJ17 [ SEEK ]   TRAJ17 [ MEM ]
Gene Expression Viewer (FireBrowse)TRAJ17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28738
GTEX Portal (Tissue expression)TRAJ17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRAJ17
DMDM Disease mutations28738
Blocks (Seattle)TRAJ17
IPIIPI00450949   
Protein Interaction databases
BioGRIDTRAJ17
STRING (EMBL)TRAJ17
ZODIACTRAJ17
Ontologies - Pathways
Huge Navigator TRAJ17 [HugePedia]
snp3D : Map Gene to Disease28738
BioCentury BCIQTRAJ17
ClinGenTRAJ17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28738
Chemical/Pharm GKB GenePA36722
Clinical trialTRAJ17
Miscellaneous
canSAR (ICR)TRAJ17 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRAJ17
EVEXTRAJ17
GoPubMedTRAJ17
iHOPTRAJ17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:33:45 CET 2017

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