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TRAV20 (T cell receptor alpha variable 20)

Identity

Other aliasTCRAV20S1
TCRAV30S1
HGNC (Hugo) TRAV20
LocusID (NCBI) 28663
Atlas_Id 75119
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 22003106 and ends at 22552153 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRAV20   12117
Cards
Entrez_Gene (NCBI)TRAV20  28663  T cell receptor alpha variable 20
AliasesTCRAV20S1; TCRAV30S1
GeneCards (Weizmann)TRAV20
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:22003106-22552153 [Contig_View]  TRAV20 [Vega]
TCGA cBioPortalTRAV20
AceView (NCBI)TRAV20
Genatlas (Paris)TRAV20
WikiGenes28663
SOURCE (Princeton)TRAV20
Genetics Home Reference (NIH)TRAV20
Genomic and cartography
GoldenPath hg38 (UCSC)TRAV20  -     chr14:22003106-22552153 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRAV20  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblTRAV20 - 14q11.2 [CytoView hg19]  TRAV20 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBITRAV20 [Mapview hg19]  TRAV20 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK127936 BC025727 BX647165
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRAV20
Cluster EST : UnigeneHs.74647 [ NCBI ]
CGAP (NCI)Hs.74647
Gene ExpressionTRAV20 [ NCBI-GEO ]   TRAV20 [ EBI - ARRAY_EXPRESS ]   TRAV20 [ SEEK ]   TRAV20 [ MEM ]
Gene Expression Viewer (FireBrowse)TRAV20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28663
GTEX Portal (Tissue expression)TRAV20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRAV20
DMDM Disease mutations28663
Blocks (Seattle)TRAV20
Protein Interaction databases
BioGRIDTRAV20
STRING (EMBL)TRAV20
ZODIACTRAV20
Ontologies - Pathways
Huge Navigator TRAV20 [HugePedia]
snp3D : Map Gene to Disease28663
BioCentury BCIQTRAV20
ClinGenTRAV20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28663
Chemical/Pharm GKB GenePA36799
Clinical trialTRAV20
Miscellaneous
canSAR (ICR)TRAV20 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRAV20
EVEXTRAV20
GoPubMedTRAV20
iHOPTRAV20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:46:57 CEST 2017

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