Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TRAV8-5 (T cell receptor alpha variable 8-5 (pseudogene))


HGNC (Hugo) TRAV8-5
HGNC Alias symbTRAV85
HGNC Previous nameT cell receptor alpha variable 8-5
 T cell receptor alpha variable 8-5 pseudogene
LocusID (NCBI) 28681
Atlas_Id 76942
Location 14q11.2  [Link to chromosome band 14q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)TRAV8-5   12150
Entrez_Gene (NCBI)TRAV8-5    T cell receptor alpha variable 8-5 (pseudogene)
AliasesTCRAV8S5; TRAV85
GeneCards (Weizmann)TRAV8-5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  TRAV8-5 [Vega]
TCGA cBioPortalTRAV8-5
AceView (NCBI)TRAV8-5
Genatlas (Paris)TRAV8-5
SOURCE (Princeton)TRAV8-5
Genetics Home Reference (NIH)TRAV8-5
Genomic and cartography
GoldenPath hg38 (UCSC)TRAV8-5  -  
GoldenPath hg19 (UCSC)TRAV8-5  -  
GoldenPathTRAV8-5 - [CytoView hg19]  TRAV8-5 - [CytoView hg38]
Genome Data Viewer NCBITRAV8-5 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB305723
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TRAV8-5
Gene ExpressionTRAV8-5 [ NCBI-GEO ]   TRAV8-5 [ EBI - ARRAY_EXPRESS ]   TRAV8-5 [ SEEK ]   TRAV8-5 [ MEM ]
Gene Expression Viewer (FireBrowse)TRAV8-5 [ Firebrowse - Broad ]
GenevisibleExpression of TRAV8-5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)28681
GTEX Portal (Tissue expression)TRAV8-5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRAV8-5
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:26:46 CEST 2021

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