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TRAV8-5 (T cell receptor alpha variable 8-5 (pseudogene))

Identity

Alias_namesT cell receptor alpha variable 8-5
T cell receptor alpha variable 8-5 pseudogene
Alias_symbol (synonym)TRAV85
TCRAV8S5
Other alias
HGNC (Hugo) TRAV8-5
LocusID (NCBI) 28681
Atlas_Id 76942
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21904328 and ends at 21904595 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

¼TR:
Nomenclature
HGNC (Hugo)TRAV8-5   12150Cards
Entrez_Gene (NCBI)TRAV8-5  28681  T cell receptor alpha variable 8-5 (pseudogene)
AliasesTCRAV8S5; TRAV85
GeneCards (Weizmann)TRAV8-5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:21904328-21904595 [Contig_View]  TRAV8-5 [Vega]
TCGA cBioPortalTRAV8-5
AceView (NCBI)TRAV8-5
Genatlas (Paris)TRAV8-5
WikiGenes28681
SOURCE (Princeton)TRAV8-5
Genetics Home Reference (NIH)TRAV8-5
Genomic and cartography
GoldenPath hg38 (UCSC)TRAV8-5  -     chr14:21904328-21904595 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRAV8-5  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblTRAV8-5 - 14q11.2 [CytoView hg19]  TRAV8-5 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBITRAV8-5 [Mapview hg19]  TRAV8-5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB305723
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TRAV8-5
Cluster EST : UnigeneHs.707964 [ NCBI ]
CGAP (NCI)Hs.707964
Gene ExpressionTRAV8-5 [ NCBI-GEO ]   TRAV8-5 [ EBI - ARRAY_EXPRESS ]   TRAV8-5 [ SEEK ]   TRAV8-5 [ MEM ]
Gene Expression Viewer (FireBrowse)TRAV8-5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28681
GTEX Portal (Tissue expression)TRAV8-5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRAV8-5
DMDM Disease mutations28681
Blocks (Seattle)TRAV8-5
Protein Interaction databases
BioGRIDTRAV8-5
STRING (EMBL)TRAV8-5
ZODIACTRAV8-5
Ontologies - Pathways
Huge Navigator TRAV8-5 [HugePedia]
snp3D : Map Gene to Disease28681
BioCentury BCIQTRAV8-5
ClinGenTRAV8-5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28681
Chemical/Pharm GKB GenePA36832
Clinical trialTRAV8-5
Miscellaneous
canSAR (ICR)TRAV8-5 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRAV8-5
EVEXTRAV8-5
GoPubMedTRAV8-5
iHOPTRAV8-5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:42:25 CEST 2017

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