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TRBJ2-2 (T cell receptor beta joining 2-2)

Identity

Alias_namesT cell receptor beta joining 2-2
Alias_symbol (synonym)TRBJ22
TCRBJ2S2
Other alias
HGNC (Hugo) TRBJ2-2
LocusID (NCBI) 28628
Atlas_Id 79283
Location 7_KI270803v1_alt  [Link to chromosome band 7]
Location_base_pair Starts at 453569 and ends at 819579 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRBJ2-2   12169
Cards
Entrez_Gene (NCBI)TRBJ2-2  28628  T cell receptor beta joining 2-2
AliasesTCRBJ2S2; TRBJ22
GeneCards (Weizmann)TRBJ2-2
Ensembl hg19 (Hinxton)ENSG00000211765 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000211765 [Gene_View]  chr7_KI270803v1_alt:453569-819579 [Contig_View]  TRBJ2-2 [Vega]
ICGC DataPortalENSG00000211765
TCGA cBioPortalTRBJ2-2
AceView (NCBI)TRBJ2-2
Genatlas (Paris)TRBJ2-2
WikiGenes28628
SOURCE (Princeton)TRBJ2-2
Genetics Home Reference (NIH)TRBJ2-2
Genomic and cartography
GoldenPath hg38 (UCSC)TRBJ2-2  -     chr7_KI270803v1_alt:453569-819579 +  7_KI270803v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRBJ2-2  -     7_KI270803v1_alt   [Description]    (hg19-Feb_2009)
EnsemblTRBJ2-2 - 7_KI270803v1_alt [CytoView hg19]  TRBJ2-2 - 7_KI270803v1_alt [CytoView hg38]
Mapping of homologs : NCBITRBJ2-2 [Mapview hg19]  TRBJ2-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY006109
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NG_001333 NT_187562
Consensus coding sequences : CCDS (NCBI)TRBJ2-2
Alternative Splicing GalleryENSG00000211765
Gene ExpressionTRBJ2-2 [ NCBI-GEO ]   TRBJ2-2 [ EBI - ARRAY_EXPRESS ]   TRBJ2-2 [ SEEK ]   TRBJ2-2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBJ2-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28628
GTEX Portal (Tissue expression)TRBJ2-2
Human Protein AtlasENSG00000211765-TRBJ2-2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBJ2-2
DMDM Disease mutations28628
Blocks (Seattle)TRBJ2-2
Human Protein Atlas [tissue]ENSG00000211765-TRBJ2-2 [tissue]
Protein Interaction databases
FunCoupENSG00000211765
BioGRIDTRBJ2-2
STRING (EMBL)TRBJ2-2
ZODIACTRBJ2-2
Ontologies - Pathways
Huge Navigator TRBJ2-2 [HugePedia]
snp3D : Map Gene to Disease28628
BioCentury BCIQTRBJ2-2
ClinGenTRBJ2-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28628
Chemical/Pharm GKB GenePA36849
Clinical trialTRBJ2-2
Miscellaneous
canSAR (ICR)TRBJ2-2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRBJ2-2
EVEXTRBJ2-2
GoPubMedTRBJ2-2
iHOPTRBJ2-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:17:31 CET 2017

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