Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TRBV19 (T cell receptor beta variable 19)

Identity

Alias_symbol (synonym)TCRBV17S1A1T
TCRBV19S1
Other alias
HGNC (Hugo) TRBV19
LocusID (NCBI) 28568
Atlas_Id 75122
Location 7_KI270803v1_alt  [Link to chromosome band 7]
Location_base_pair Starts at 824013 and ends at 825491 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRBV19   12194
Cards
Entrez_Gene (NCBI)TRBV19  28568  T cell receptor beta variable 19
AliasesTCRBV17S1A1T; TCRBV19S1
GeneCards (Weizmann)TRBV19
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7_KI270803v1_alt:824013-825491 [Contig_View]  TRBV19 [Vega]
TCGA cBioPortalTRBV19
AceView (NCBI)TRBV19
Genatlas (Paris)TRBV19
WikiGenes28568
SOURCE (Princeton)TRBV19
Genetics Home Reference (NIH)TRBV19
Genomic and cartography
GoldenPath hg38 (UCSC)TRBV19  -     chr7_KI270803v1_alt:824013-825491 +  7_KI270803v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRBV19  -     7_KI270803v1_alt   [Description]    (hg19-Feb_2009)
EnsemblTRBV19 - 7_KI270803v1_alt [CytoView hg19]  TRBV19 - 7_KI270803v1_alt [CytoView hg38]
Mapping of homologs : NCBITRBV19 [Mapview hg19]  TRBV19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC073930
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NG_001333 NT_187562
Consensus coding sequences : CCDS (NCBI)TRBV19
Cluster EST : UnigeneHs.511720 [ NCBI ]
CGAP (NCI)Hs.511720
Gene ExpressionTRBV19 [ NCBI-GEO ]   TRBV19 [ EBI - ARRAY_EXPRESS ]   TRBV19 [ SEEK ]   TRBV19 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBV19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28568
GTEX Portal (Tissue expression)TRBV19
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBV19
DMDM Disease mutations28568
Blocks (Seattle)TRBV19
Protein Interaction databases
BioGRIDTRBV19
STRING (EMBL)TRBV19
ZODIACTRBV19
Ontologies - Pathways
Huge Navigator TRBV19 [HugePedia]
snp3D : Map Gene to Disease28568
BioCentury BCIQTRBV19
ClinGenTRBV19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28568
Chemical/Pharm GKB GenePA36874
Clinical trialTRBV19
Miscellaneous
canSAR (ICR)TRBV19 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRBV19
EVEXTRBV19
GoPubMedTRBV19
iHOPTRBV19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:33:49 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.