Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TRBV21-1 (T cell receptor beta variable 21-1 (pseudogene))

Identity

Alias_namesT cell receptor beta variable 21-1
T cell receptor beta variable 21-1 pseudogene
Alias_symbol (synonym)TRBV211
TCRBV10S1P
TCRBV21S1
Other alias
HGNC (Hugo) TRBV21-1
LocusID (NCBI) 28566
Atlas_Id 77427
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 142344411 and ends at 142344835 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRBV21-1   12198
Cards
Entrez_Gene (NCBI)TRBV21-1  28566  T cell receptor beta variable 21-1 (pseudogene)
AliasesTCRBV10S1P; TCRBV21S1; TRBV211
GeneCards (Weizmann)TRBV21-1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:142344411-142344835 [Contig_View]  TRBV21-1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:142344411-142344835 [Contig_View]  TRBV21-1 [Vega]
TCGA cBioPortalTRBV21-1
AceView (NCBI)TRBV21-1
Genatlas (Paris)TRBV21-1
WikiGenes28566
SOURCE (Princeton)TRBV21-1
Genetics Home Reference (NIH)TRBV21-1
Genomic and cartography
GoldenPath hg19 (UCSC)TRBV21-1  -     chr7:142344411-142344835 +  7q34   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TRBV21-1  -     7q34   [Description]    (hg38-Dec_2013)
EnsemblTRBV21-1 - 7q34 [CytoView hg19]  TRBV21-1 - 7q34 [CytoView hg38]
Mapping of homologs : NCBITRBV21-1 [Mapview hg19]  TRBV21-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB306187 AF088291 AF088299 AF088320 AF088323
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NG_001333 NT_007933 NT_187562 NW_004929333
Consensus coding sequences : CCDS (NCBI)TRBV21-1
Cluster EST : UnigeneHs.722418 [ NCBI ]
CGAP (NCI)Hs.722418
Gene ExpressionTRBV21-1 [ NCBI-GEO ]   TRBV21-1 [ EBI - ARRAY_EXPRESS ]   TRBV21-1 [ SEEK ]   TRBV21-1 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBV21-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28566
GTEX Portal (Tissue expression)TRBV21-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBV21-1
DMDM Disease mutations28566
Blocks (Seattle)TRBV21-1
Protein Interaction databases
BioGRIDTRBV21-1
STRING (EMBL)TRBV21-1
ZODIACTRBV21-1
Ontologies - Pathways
Huge Navigator TRBV21-1 [HugePedia]
snp3D : Map Gene to Disease28566
BioCentury BCIQTRBV21-1
ClinGenTRBV21-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28566
Chemical/Pharm GKB GenePA36878
Clinical trialTRBV21-1
Miscellaneous
canSAR (ICR)TRBV21-1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRBV21-1
EVEXTRBV21-1
GoPubMedTRBV21-1
iHOPTRBV21-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:49:34 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.