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TRBV25OR9-2 (T cell receptor beta variable 25/OR9-2 (pseudogene))

Identity

Alias (NCBI)TCRBV11O
TCRBV11S2O
TCRBV25S2
HGNC (Hugo) TRBV25OR9-2
HGNC Alias symbTRBV25/OR9-2
TCRBV11S2O
TCRBV25S2
HGNC Alias nameT-cell receptor, beta variable region 11, orphon
HGNC Previous nameTCRBV11O
HGNC Previous nameT cell receptor beta variable 25/OR9-2
 T cell receptor beta variable 25/OR9-2 pseudogene
LocusID (NCBI) 6960
Atlas_Id 76706
Location 9p13.3  [Link to chromosome band 9p13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)TRBV25OR9-2   12206
Cards
Entrez_Gene (NCBI)TRBV25OR9-2    T cell receptor beta variable 25/OR9-2 (pseudogene)
AliasesTCRBV11O; TCRBV11S2O; TCRBV25S2
GeneCards (Weizmann)TRBV25OR9-2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  TRBV25OR9-2 [Vega]
TCGA cBioPortalTRBV25OR9-2
AceView (NCBI)TRBV25OR9-2
Genatlas (Paris)TRBV25OR9-2
SOURCE (Princeton)TRBV25OR9-2
Genetics Home Reference (NIH)TRBV25OR9-2
Genomic and cartography
GoldenPath hg38 (UCSC)TRBV25OR9-2  -  
GoldenPath hg19 (UCSC)TRBV25OR9-2  -  
GoldenPathTRBV25OR9-2 - [CytoView hg19]  TRBV25OR9-2 - [CytoView hg38]
Genome Data Viewer NCBITRBV25OR9-2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DQ358121
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TRBV25OR9-2
Gene ExpressionTRBV25OR9-2 [ NCBI-GEO ]   TRBV25OR9-2 [ EBI - ARRAY_EXPRESS ]   TRBV25OR9-2 [ SEEK ]   TRBV25OR9-2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBV25OR9-2 [ Firebrowse - Broad ]
GenevisibleExpression of TRBV25OR9-2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6960
GTEX Portal (Tissue expression)TRBV25OR9-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBV25OR9-2
Protein Interaction databases
BioGRIDTRBV25OR9-2
STRING (EMBL)TRBV25OR9-2
ZODIACTRBV25OR9-2
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRBV25OR9-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:47 CEST 2021

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