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TRBV27 (T cell receptor beta variable 27)

Identity

Alias_symbol (synonym)TCRBV14S1
TCRBV27S1
Other alias
HGNC (Hugo) TRBV27
LocusID (NCBI) 28560
Atlas_Id 75123
Location 7_KI270803v1_alt  [Link to chromosome band 7]
Location_base_pair Starts at 707812 and ends at 721030 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRBV27   12208
Cards
Entrez_Gene (NCBI)TRBV27  28560  T cell receptor beta variable 27
AliasesTCRBV14S1; TCRBV27S1
GeneCards (Weizmann)TRBV27
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7_KI270803v1_alt:707812-721030 [Contig_View]  TRBV27 [Vega]
TCGA cBioPortalTRBV27
AceView (NCBI)TRBV27
Genatlas (Paris)TRBV27
WikiGenes28560
SOURCE (Princeton)TRBV27
Genetics Home Reference (NIH)TRBV27
Genomic and cartography
GoldenPath hg38 (UCSC)TRBV27  -     chr7_KI270803v1_alt:707812-721030 +  7_KI270803v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRBV27  -     7_KI270803v1_alt   [Description]    (hg19-Feb_2009)
EnsemblTRBV27 - 7_KI270803v1_alt [CytoView hg19]  TRBV27 - 7_KI270803v1_alt [CytoView hg38]
Mapping of homologs : NCBITRBV27 [Mapview hg19]  TRBV27 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093303
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NG_001333 NT_187562
Consensus coding sequences : CCDS (NCBI)TRBV27
Cluster EST : UnigeneHs.511522 [ NCBI ]
CGAP (NCI)Hs.511522
Gene ExpressionTRBV27 [ NCBI-GEO ]   TRBV27 [ EBI - ARRAY_EXPRESS ]   TRBV27 [ SEEK ]   TRBV27 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBV27 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28560
GTEX Portal (Tissue expression)TRBV27
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBV27
DMDM Disease mutations28560
Blocks (Seattle)TRBV27
IPIIPI00807732   IPI00980603   
Protein Interaction databases
BioGRIDTRBV27
STRING (EMBL)TRBV27
ZODIACTRBV27
Ontologies - Pathways
Huge Navigator TRBV27 [HugePedia]
snp3D : Map Gene to Disease28560
BioCentury BCIQTRBV27
ClinGenTRBV27
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28560
Chemical/Pharm GKB GenePA36888
Clinical trialTRBV27
Miscellaneous
canSAR (ICR)TRBV27 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRBV27
EVEXTRBV27
GoPubMedTRBV27
iHOPTRBV27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:19:37 CET 2017

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