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TRBV3-2 (T cell receptor beta variable 3-2 (pseudogene))

Identity

Alias_namesT cell receptor beta variable 3-2
T cell receptor beta variable 3-2 pseudogene
T cell receptor beta variable 3-2 (pseudogene)
Alias_symbol (synonym)TRBV32
TCRBV3S2
TCRBV9S2A2PT
Other alias
HGNC (Hugo) TRBV3-2
LocusID (NCBI) 28618
Atlas_Id 79468
Location 7_KI270803v1_alt  [Link to chromosome band 7]
Location_base_pair Starts at 321025 and ends at 321556 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRBV3-2   12213
Cards
Entrez_Gene (NCBI)TRBV3-2  28618  T cell receptor beta variable 3-2 (pseudogene)
AliasesTCRBV3S2; TCRBV9S2A2PT; TRBV32
GeneCards (Weizmann)TRBV3-2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7_KI270803v1_alt:321025-321556 [Contig_View]  TRBV3-2 [Vega]
TCGA cBioPortalTRBV3-2
AceView (NCBI)TRBV3-2
Genatlas (Paris)TRBV3-2
WikiGenes28618
SOURCE (Princeton)TRBV3-2
Genetics Home Reference (NIH)TRBV3-2
Genomic and cartography
GoldenPath hg38 (UCSC)TRBV3-2  -     chr7_KI270803v1_alt:321025-321556 +  7_KI270803v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRBV3-2  -     7_KI270803v1_alt   [Description]    (hg19-Feb_2009)
EnsemblTRBV3-2 - 7_KI270803v1_alt [CytoView hg19]  TRBV3-2 - 7_KI270803v1_alt [CytoView hg38]
Mapping of homologs : NCBITRBV3-2 [Mapview hg19]  TRBV3-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X57608
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NG_001333 NT_187562
Consensus coding sequences : CCDS (NCBI)TRBV3-2
Gene ExpressionTRBV3-2 [ NCBI-GEO ]   TRBV3-2 [ EBI - ARRAY_EXPRESS ]   TRBV3-2 [ SEEK ]   TRBV3-2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBV3-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28618
GTEX Portal (Tissue expression)TRBV3-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBV3-2
DMDM Disease mutations28618
Blocks (Seattle)TRBV3-2
Protein Interaction databases
BioGRIDTRBV3-2
STRING (EMBL)TRBV3-2
ZODIACTRBV3-2
Ontologies - Pathways
Huge Navigator TRBV3-2 [HugePedia]
snp3D : Map Gene to Disease28618
BioCentury BCIQTRBV3-2
ClinGenTRBV3-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28618
Chemical/Pharm GKB GenePA36893
Clinical trialTRBV3-2
Miscellaneous
canSAR (ICR)TRBV3-2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRBV3-2
EVEXTRBV3-2
GoPubMedTRBV3-2
iHOPTRBV3-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:17:32 CET 2017

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