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TRDMT1 (tRNA aspartic acid methyltransferase 1)

Identity

Alias_namesDNMT2
DNA (cytosine-5-)-methyltransferase 2
Alias_symbol (synonym)RNMT1
Other aliasDMNT2
MHSAIIP
PUMET
HGNC (Hugo) TRDMT1
LocusID (NCBI) 1787
Atlas_Id 40348
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 17137336 and ends at 17202071 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TRDMT1 (10p13) / NID2 (14q22.1)TRDMT1 (10p13) / PANK1 (10q23.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TRDMT1   2977
Cards
Entrez_Gene (NCBI)TRDMT1  1787  tRNA aspartic acid methyltransferase 1
AliasesDMNT2; DNMT2; MHSAIIP; PUMET; 
RNMT1
GeneCards (Weizmann)TRDMT1
Ensembl hg19 (Hinxton)ENSG00000107614 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000107614 [Gene_View]  ENSG00000107614 [Sequence]  chr10:17137336-17202071 [Contig_View]  TRDMT1 [Vega]
ICGC DataPortalENSG00000107614
TCGA cBioPortalTRDMT1
AceView (NCBI)TRDMT1
Genatlas (Paris)TRDMT1
WikiGenes1787
SOURCE (Princeton)TRDMT1
Genetics Home Reference (NIH)TRDMT1
Genomic and cartography
GoldenPath hg38 (UCSC)TRDMT1  -     chr10:17137336-17202071 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRDMT1  -     10p13   [Description]    (hg19-Feb_2009)
GoldenPathTRDMT1 - 10p13 [CytoView hg19]  TRDMT1 - 10p13 [CytoView hg38]
ImmunoBaseENSG00000107614
Mapping of homologs : NCBITRDMT1 [Mapview hg19]  TRDMT1 [Mapview hg38]
OMIM602478   
Gene and transcription
Genbank (Entrez)AA399591 AF012128 AF045888 AF329940 AF329941
RefSeq transcript (Entrez)NM_001321006 NM_001321007 NM_001351219 NM_001351220 NM_001351221 NM_001351222 NM_001351223 NM_004412 NM_176081 NM_176083 NM_176084 NM_176085 NM_176086
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRDMT1
Alternative Splicing GalleryENSG00000107614
Gene ExpressionTRDMT1 [ NCBI-GEO ]   TRDMT1 [ EBI - ARRAY_EXPRESS ]   TRDMT1 [ SEEK ]   TRDMT1 [ MEM ]
Gene Expression Viewer (FireBrowse)TRDMT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)1787
GTEX Portal (Tissue expression)TRDMT1
Human Protein AtlasENSG00000107614-TRDMT1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRDMT1
DMDM Disease mutations1787
Blocks (Seattle)TRDMT1
Human Protein Atlas [tissue]ENSG00000107614-TRDMT1 [tissue]
HPRD16001
IPIIPI00034003   IPI00219905   IPI00219906   IPI00219907   IPI00219908   IPI00221269   IPI00910354   IPI00643876   IPI00643658   IPI00478346   IPI00922351   
Protein Interaction databases
FunCoupENSG00000107614
BioGRIDTRDMT1
STRING (EMBL)TRDMT1
ZODIACTRDMT1
Ontologies - Pathways
Huge Navigator TRDMT1 [HugePedia]
snp3D : Map Gene to Disease1787
BioCentury BCIQTRDMT1
ClinGenTRDMT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1787
Chemical/Pharm GKB GenePA162406922
Clinical trialTRDMT1
Miscellaneous
canSAR (ICR)TRDMT1 (select the gene name)
DataMed IndexTRDMT1
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRDMT1
EVEXTRDMT1
GoPubMedTRDMT1
iHOPTRDMT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:14:13 CET 2020

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