Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TREML5P (triggering receptor expressed on myeloid cells like 5, pseudogene)

Identity

Alias_namesTREML2P
TREML2P1
triggering receptor expressed on myeloid cells-like 2 pseudogene
triggering receptor expressed on myeloid cells-like 2 pseudogene 1
triggering receptor expressed on myeloid cells-like 5, pseudogene
Alias_symbol (synonym)TLT5
Other alias
HGNC (Hugo) TREML5P
LocusID (NCBI) 221438
Atlas_Id 75136
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 41249377 and ends at 41249589 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TREML5P   30808
Cards
Entrez_Gene (NCBI)TREML5P  221438  triggering receptor expressed on myeloid cells like 5, pseudogene
AliasesTLT5; TREML2P; TREML2P1
GeneCards (Weizmann)TREML5P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:41249377-41249589 [Contig_View]  TREML5P [Vega]
TCGA cBioPortalTREML5P
AceView (NCBI)TREML5P
Genatlas (Paris)TREML5P
WikiGenes221438
SOURCE (Princeton)TREML5P
Genetics Home Reference (NIH)TREML5P
Genomic and cartography
GoldenPath hg38 (UCSC)TREML5P  -     chr6:41249377-41249589 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TREML5P  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblTREML5P - 6p21.1 [CytoView hg19]  TREML5P - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBITREML5P [Mapview hg19]  TREML5P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF534827
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TREML5P
Cluster EST : UnigeneHs.639392 [ NCBI ]
CGAP (NCI)Hs.639392
Gene ExpressionTREML5P [ NCBI-GEO ]   TREML5P [ EBI - ARRAY_EXPRESS ]   TREML5P [ SEEK ]   TREML5P [ MEM ]
Gene Expression Viewer (FireBrowse)TREML5P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)221438
GTEX Portal (Tissue expression)TREML5P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TREML5P
DMDM Disease mutations221438
Blocks (Seattle)TREML5P
Protein Interaction databases
BioGRIDTREML5P
STRING (EMBL)TREML5P
ZODIACTREML5P
Ontologies - Pathways
Huge Navigator TREML5P [HugePedia]
snp3D : Map Gene to Disease221438
BioCentury BCIQTREML5P
ClinGenTREML5P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD221438
Chemical/Pharm GKB GenePA134910321
Clinical trialTREML5P
Miscellaneous
canSAR (ICR)TREML5P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTREML5P
EVEXTREML5P
GoPubMedTREML5P
iHOPTREML5P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:36:31 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.