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TRG-AS1 (T cell receptor gamma locus antisense RNA 1)

Identity

Alias (NCBI)TCRGV
HGNC (Hugo) TRG-AS1
HGNC Alias nameTRG antisense RNA 1
LocusID (NCBI) 100506776
Atlas_Id 58311
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 38341577 and ends at 38378637 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TRG-AS1   48974
Cards
Entrez_Gene (NCBI)TRG-AS1    T cell receptor gamma locus antisense RNA 1
AliasesTCRGV
GeneCards (Weizmann)TRG-AS1
Ensembl hg19 (Hinxton)ENSG00000281103 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281103 [Gene_View]  ENSG00000281103 [Sequence]  chr7:38341577-38378637 [Contig_View]  TRG-AS1 [Vega]
ICGC DataPortalENSG00000281103
TCGA cBioPortalTRG-AS1
AceView (NCBI)TRG-AS1
Genatlas (Paris)TRG-AS1
SOURCE (Princeton)TRG-AS1
Genetics Home Reference (NIH)TRG-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TRG-AS1  -     chr7:38341577-38378637 +  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRG-AS1  -     7p14.1   [Description]    (hg19-Feb_2009)
GoldenPathTRG-AS1 - 7p14.1 [CytoView hg19]  TRG-AS1 - 7p14.1 [CytoView hg38]
ImmunoBaseENSG00000281103
Genome Data Viewer NCBITRG-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK125646 AK130649 BQ002637 M27346
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TRG-AS1
Gene ExpressionTRG-AS1 [ NCBI-GEO ]   TRG-AS1 [ EBI - ARRAY_EXPRESS ]   TRG-AS1 [ SEEK ]   TRG-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TRG-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TRG-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100506776
GTEX Portal (Tissue expression)TRG-AS1
Human Protein AtlasENSG00000281103-TRG-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRG-AS1
Human Protein Atlas [tissue]ENSG00000281103-TRG-AS1 [tissue]
Protein Interaction databases
BioGRIDTRG-AS1
STRING (EMBL)TRG-AS1
ZODIACTRG-AS1
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRG-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:36:16 CEST 2021

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