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TRGV5 (T cell receptor gamma variable 5)

Identity

Alias_namesTCRGV5
Alias_symbol (synonym)V1S5
Other alias
HGNC (Hugo) TRGV5
LocusID (NCBI) 6978
Atlas_Id 75141
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 38343894 and ends at 38350003 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRGV5   12290
Cards
Entrez_Gene (NCBI)TRGV5  6978  T cell receptor gamma variable 5
AliasesTCRGV5; V1S5
GeneCards (Weizmann)TRGV5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:38343894-38350003 [Contig_View]  TRGV5 [Vega]
TCGA cBioPortalTRGV5
AceView (NCBI)TRGV5
Genatlas (Paris)TRGV5
WikiGenes6978
SOURCE (Princeton)TRGV5
Genetics Home Reference (NIH)TRGV5
Genomic and cartography
GoldenPath hg38 (UCSC)TRGV5  -     chr7:38343894-38350003 -  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRGV5  -     7p14.1   [Description]    (hg19-Feb_2009)
EnsemblTRGV5 - 7p14.1 [CytoView hg19]  TRGV5 - 7p14.1 [CytoView hg38]
Mapping of homologs : NCBITRGV5 [Mapview hg19]  TRGV5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035592
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRGV5
Cluster EST : UnigeneHs.731375 [ NCBI ]
CGAP (NCI)Hs.731375
Gene ExpressionTRGV5 [ NCBI-GEO ]   TRGV5 [ EBI - ARRAY_EXPRESS ]   TRGV5 [ SEEK ]   TRGV5 [ MEM ]
Gene Expression Viewer (FireBrowse)TRGV5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6978
GTEX Portal (Tissue expression)TRGV5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRGV5
DMDM Disease mutations6978
Blocks (Seattle)TRGV5
Protein Interaction databases
BioGRIDTRGV5
STRING (EMBL)TRGV5
ZODIACTRGV5
Ontologies - Pathways
Huge Navigator TRGV5 [HugePedia]
snp3D : Map Gene to Disease6978
BioCentury BCIQTRGV5
ClinGenTRGV5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6978
Chemical/Pharm GKB GenePA36970
Clinical trialTRGV5
Miscellaneous
canSAR (ICR)TRGV5 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRGV5
EVEXTRGV5
GoPubMedTRGV5
iHOPTRGV5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:59:33 CEST 2017

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