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TRGV9 (T cell receptor gamma variable 9)

Identity

Alias_namesgamma
variable region V9
Alias_symbol (synonym)V2
Other aliasTCRGV9
TRGC1
HGNC (Hugo) TRGV9
LocusID (NCBI) 6983
Atlas_Id 45924
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 38259642 and ends at 38273632 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRGV9   12295
Cards
Entrez_Gene (NCBI)TRGV9  6983  T cell receptor gamma variable 9
AliasesTCRGV9; TRGC1; V2
GeneCards (Weizmann)TRGV9
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:38259642-38273632 [Contig_View]  TRGV9 [Vega]
TCGA cBioPortalTRGV9
AceView (NCBI)TRGV9
Genatlas (Paris)TRGV9
WikiGenes6983
SOURCE (Princeton)TRGV9
Genetics Home Reference (NIH)TRGV9
Genomic and cartography
GoldenPath hg38 (UCSC)TRGV9  -     chr7:38259642-38273632 -  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRGV9  -     7p14.1   [Description]    (hg19-Feb_2009)
EnsemblTRGV9 - 7p14.1 [CytoView hg19]  TRGV9 - 7p14.1 [CytoView hg38]
Mapping of homologs : NCBITRGV9 [Mapview hg19]  TRGV9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC062761 BC072387 BC072396 M16768
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRGV9
Cluster EST : UnigeneHs.534032 [ NCBI ]
CGAP (NCI)Hs.534032
Gene ExpressionTRGV9 [ NCBI-GEO ]   TRGV9 [ EBI - ARRAY_EXPRESS ]   TRGV9 [ SEEK ]   TRGV9 [ MEM ]
Gene Expression Viewer (FireBrowse)TRGV9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6983
GTEX Portal (Tissue expression)TRGV9
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRGV9
DMDM Disease mutations6983
Blocks (Seattle)TRGV9
IPIIPI00925160   
Protein Interaction databases
BioGRIDTRGV9
STRING (EMBL)TRGV9
ZODIACTRGV9
Ontologies - Pathways
Huge Navigator TRGV9 [HugePedia]
snp3D : Map Gene to Disease6983
BioCentury BCIQTRGV9
ClinGenTRGV9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6983
Chemical/Pharm GKB GenePA36975
Clinical trialTRGV9
Miscellaneous
canSAR (ICR)TRGV9 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRGV9
EVEXTRGV9
GoPubMedTRGV9
iHOPTRGV9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 21:04:03 CET 2017

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