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TRIL (TLR4 interactor with leucine rich repeats)

Identity

Alias_symbol (synonym)KIAA0644
Other alias-
HGNC (Hugo) TRIL
LocusID (NCBI) 9865
Atlas_Id 75143
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 28953358 and ends at 28958413 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TRIL   22200
Cards
Entrez_Gene (NCBI)TRIL  9865  TLR4 interactor with leucine rich repeats
Aliases
GeneCards (Weizmann)TRIL
Ensembl hg19 (Hinxton)ENSG00000255690 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255690 [Gene_View]  chr7:28953358-28958413 [Contig_View]  TRIL [Vega]
ICGC DataPortalENSG00000255690
TCGA cBioPortalTRIL
AceView (NCBI)TRIL
Genatlas (Paris)TRIL
WikiGenes9865
SOURCE (Princeton)TRIL
Genetics Home Reference (NIH)TRIL
Genomic and cartography
GoldenPath hg38 (UCSC)TRIL  -     chr7:28953358-28958413 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIL  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblTRIL - 7p14.3 [CytoView hg19]  TRIL - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBITRIL [Mapview hg19]  TRIL [Mapview hg38]
OMIM613356   
Gene and transcription
Genbank (Entrez)AB014544 AK293803 BC036337 CD580022
RefSeq transcript (Entrez)NM_014817
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRIL
Cluster EST : UnigeneHs.744120 [ NCBI ]
CGAP (NCI)Hs.744120
Alternative Splicing GalleryENSG00000255690
Gene ExpressionTRIL [ NCBI-GEO ]   TRIL [ EBI - ARRAY_EXPRESS ]   TRIL [ SEEK ]   TRIL [ MEM ]
Gene Expression Viewer (FireBrowse)TRIL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9865
GTEX Portal (Tissue expression)TRIL
Human Protein AtlasENSG00000255690-TRIL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L0X0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L0X0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L0X0
Splice isoforms : SwissVarQ7L0X0
PhosPhoSitePlusQ7L0X0
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)Cys-rich_flank_reg_C    FN3_dom    L_dom-like    Leu-rich_rpt    Leu-rich_rpt_typical-subtyp   
Domain families : Pfam (Sanger)LRR_8 (PF13855)    LRRCT (PF01463)   
Domain families : Pfam (NCBI)pfam13855    pfam01463   
Domain families : Smart (EMBL)LRR_TYP (SM00369)  LRRCT (SM00082)  
Conserved Domain (NCBI)TRIL
DMDM Disease mutations9865
Blocks (Seattle)TRIL
SuperfamilyQ7L0X0
Human Protein Atlas [tissue]ENSG00000255690-TRIL [tissue]
Peptide AtlasQ7L0X0
IPIIPI00006556   
Protein Interaction databases
DIP (DOE-UCLA)Q7L0X0
IntAct (EBI)Q7L0X0
FunCoupENSG00000255690
BioGRIDTRIL
STRING (EMBL)TRIL
ZODIACTRIL
Ontologies - Pathways
QuickGOQ7L0X0
Ontology : AmiGOlipopolysaccharide binding  regulation of cytokine production involved in immune response  inflammatory response  toll-like receptor 4 signaling pathway  innate immune response  lipopolysaccharide receptor complex  
Ontology : EGO-EBIlipopolysaccharide binding  regulation of cytokine production involved in immune response  inflammatory response  toll-like receptor 4 signaling pathway  innate immune response  lipopolysaccharide receptor complex  
NDEx NetworkTRIL
Atlas of Cancer Signalling NetworkTRIL
Wikipedia pathwaysTRIL
Orthology - Evolution
OrthoDB9865
GeneTree (enSembl)ENSG00000255690
Phylogenetic Trees/Animal Genes : TreeFamTRIL
HOVERGENQ7L0X0
HOGENOMQ7L0X0
Homologs : HomoloGeneTRIL
Homology/Alignments : Family Browser (UCSC)TRIL
Gene fusions - Rearrangements
Tumor Fusion PortalTRIL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTRIL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TRIL
dbVarTRIL
ClinVarTRIL
1000_GenomesTRIL 
Exome Variant ServerTRIL
ExAC (Exome Aggregation Consortium)ENSG00000255690
GNOMAD BrowserENSG00000255690
Genetic variants : HAPMAP9865
Genomic Variants (DGV)TRIL [DGVbeta]
DECIPHERTRIL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTRIL 
Mutations
ICGC Data PortalTRIL 
TCGA Data PortalTRIL 
Broad Tumor PortalTRIL
OASIS PortalTRIL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTRIL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TRIL
DgiDB (Drug Gene Interaction Database)TRIL
DoCM (Curated mutations)TRIL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TRIL (select a term)
intoGenTRIL
Cancer3DTRIL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613356   
Orphanet
DisGeNETTRIL
MedgenTRIL
Genetic Testing Registry TRIL
NextProtQ7L0X0 [Medical]
TSGene9865
GENETestsTRIL
Target ValidationTRIL
Huge Navigator TRIL [HugePedia]
snp3D : Map Gene to Disease9865
BioCentury BCIQTRIL
ClinGenTRIL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9865
Chemical/Pharm GKB GenePA166048954
Clinical trialTRIL
Miscellaneous
canSAR (ICR)TRIL (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIL
EVEXTRIL
GoPubMedTRIL
iHOPTRIL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:19:43 CET 2017

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