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TRIL (TLR4 interactor with leucine rich repeats)

Identity

Alias (NCBI)-
HGNC (Hugo) TRIL
HGNC Alias symbKIAA0644
LocusID (NCBI) 9865
Atlas_Id 75143
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 28953358 and ends at 28958330 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TRIL   22200
Cards
Entrez_Gene (NCBI)TRIL    TLR4 interactor with leucine rich repeats
Aliases
GeneCards (Weizmann)TRIL
Ensembl hg19 (Hinxton)ENSG00000255690 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255690 [Gene_View]  ENSG00000255690 [Sequence]  chr7:28953358-28958330 [Contig_View]  TRIL [Vega]
ICGC DataPortalENSG00000255690
TCGA cBioPortalTRIL
AceView (NCBI)TRIL
Genatlas (Paris)TRIL
SOURCE (Princeton)TRIL
Genetics Home Reference (NIH)TRIL
Genomic and cartography
GoldenPath hg38 (UCSC)TRIL  -     chr7:28953358-28958330 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIL  -     7p14.3   [Description]    (hg19-Feb_2009)
GoldenPathTRIL - 7p14.3 [CytoView hg19]  TRIL - 7p14.3 [CytoView hg38]
ImmunoBaseENSG00000255690
Genome Data Viewer NCBITRIL [Mapview hg19]  
OMIM613356   
Gene and transcription
Genbank (Entrez)AB014544 AK293803 BC036337 CD580022
RefSeq transcript (Entrez)NM_014817
Consensus coding sequences : CCDS (NCBI)TRIL
Gene ExpressionTRIL [ NCBI-GEO ]   TRIL [ EBI - ARRAY_EXPRESS ]   TRIL [ SEEK ]   TRIL [ MEM ]
Gene Expression Viewer (FireBrowse)TRIL [ Firebrowse - Broad ]
GenevisibleExpression of TRIL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9865
GTEX Portal (Tissue expression)TRIL
Human Protein AtlasENSG00000255690-TRIL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L0X0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L0X0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L0X0
PhosPhoSitePlusQ7L0X0
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)Cys-rich_flank_reg_C    FN3_dom    Leu-rich_rpt    Leu-rich_rpt_typical-subtyp    LRR_dom_sf   
Domain families : Pfam (Sanger)LRR_8 (PF13855)    LRRCT (PF01463)   
Domain families : Pfam (NCBI)pfam13855    pfam01463   
Domain families : Smart (EMBL)LRR_TYP (SM00369)  LRRCT (SM00082)  
Conserved Domain (NCBI)TRIL
SuperfamilyQ7L0X0
AlphaFold pdb e-kbQ7L0X0   
Human Protein Atlas [tissue]ENSG00000255690-TRIL [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q7L0X0
IntAct (EBI)Q7L0X0
BioGRIDTRIL
STRING (EMBL)TRIL
ZODIACTRIL
Ontologies - Pathways
QuickGOQ7L0X0
Ontology : AmiGOlipopolysaccharide binding  lipopolysaccharide binding  regulation of cytokine production involved in immune response  regulation of cytokine production involved in immune response  extracellular space  inflammatory response  extracellular matrix  toll-like receptor 4 signaling pathway  toll-like receptor 4 signaling pathway  innate immune response  lipopolysaccharide receptor complex  lipopolysaccharide receptor complex  
Ontology : EGO-EBIlipopolysaccharide binding  lipopolysaccharide binding  regulation of cytokine production involved in immune response  regulation of cytokine production involved in immune response  extracellular space  inflammatory response  extracellular matrix  toll-like receptor 4 signaling pathway  toll-like receptor 4 signaling pathway  innate immune response  lipopolysaccharide receptor complex  lipopolysaccharide receptor complex  
NDEx NetworkTRIL
Atlas of Cancer Signalling NetworkTRIL
Wikipedia pathwaysTRIL
Orthology - Evolution
OrthoDB9865
GeneTree (enSembl)ENSG00000255690
Phylogenetic Trees/Animal Genes : TreeFamTRIL
Homologs : HomoloGeneTRIL
Homology/Alignments : Family Browser (UCSC)TRIL
Gene fusions - Rearrangements
Fusion : QuiverTRIL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTRIL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TRIL
dbVarTRIL
ClinVarTRIL
MonarchTRIL
1000_GenomesTRIL 
Exome Variant ServerTRIL
GNOMAD BrowserENSG00000255690
Varsome BrowserTRIL
ACMGTRIL variants
VarityQ7L0X0
Genomic Variants (DGV)TRIL [DGVbeta]
DECIPHERTRIL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTRIL 
Mutations
ICGC Data PortalTRIL 
TCGA Data PortalTRIL 
Broad Tumor PortalTRIL
OASIS PortalTRIL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTRIL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTRIL
Mutations and Diseases : HGMDTRIL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTRIL
DgiDB (Drug Gene Interaction Database)TRIL
DoCM (Curated mutations)TRIL
CIViC (Clinical Interpretations of Variants in Cancer)TRIL
Cancer3DTRIL
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613356   
Orphanet
DisGeNETTRIL
MedgenTRIL
Genetic Testing Registry TRIL
NextProtQ7L0X0 [Medical]
GENETestsTRIL
Target ValidationTRIL
Huge Navigator TRIL [HugePedia]
ClinGenTRIL
Clinical trials, drugs, therapy
MyCancerGenomeTRIL
Protein Interactions : CTDTRIL
Pharm GKB GenePA166048954
PharosQ7L0X0
Clinical trialTRIL
Miscellaneous
canSAR (ICR)TRIL
HarmonizomeTRIL
DataMed IndexTRIL
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRIL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:26:52 CEST 2021

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