TRIM13 (tripartite motif-containing 13)

Identity

Other names	CAR
	DLEU5
	LEU5
	RFP2
	RNF77
HGNC	TRIM13
Location	13q14
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	TRIM13   9976
Entrez_Gene	TRIM13  10206  tripartite motif-containing 13
	Cards
GeneCards	TRIM13
Ensembl	TRIM13 [Search_View]   ENSG00000204977 [Gene_View]
Genatlas	TRIM13
GeneLynx	TRIM13
eGenome	TRIM13
euGene	10206
	Genomic and cartography
GoldenPath	TRIM13  -  13q14   chr13:49469144-49490604 +  13q14.3   [Description]    (hg18-March_2006)
Ensembl	TRIM13 - 13q14.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TRIM13
	Gene and transcription
Genbank	AF220127 [ ENTREZ ]
Genbank	AF220128 [ ENTREZ ]
Genbank	AF241850 [ ENTREZ ]
Genbank	AJ224819 [ ENTREZ ]
Genbank	AK001806 [ ENTREZ ]
RefSeq	NM_001007278 [ SRS ]    NM_001007278 [ ENTREZ ]
RefSeq	NM_005798 [ SRS ]    NM_005798 [ ENTREZ ]
RefSeq	NM_052811 [ SRS ]    NM_052811 [ ENTREZ ]
RefSeq	NM_213590 [ SRS ]    NM_213590 [ ENTREZ ]
RefSeq	AC_000056 [ SRS ]    AC_000056 [ ENTREZ ]
RefSeq	AC_000145 [ SRS ]    AC_000145 [ ENTREZ ]
RefSeq	NC_000013 [ SRS ]    NC_000013 [ ENTREZ ]
RefSeq	NT_024524 [ SRS ]    NT_024524 [ ENTREZ ]
RefSeq	NW_001838074 [ SRS ]    NW_001838074 [ ENTREZ ]
RefSeq	NW_925473 [ SRS ]    NW_925473 [ ENTREZ ]
AceView	TRIM13 AceView - NCBI
Unigene	Hs.436922 [ SRS ]    Hs.436922 [ NCBI ]     HS436922 [ spliceNest ]
	Protein : pattern, domain, 3D structure
SwissProt	O60858 [ SRS]    O60858 [ EXPASY ]     O60858 [ INTERPRO ]     O60858 [ UNIPROT ]
Prosite	PS50119 ZF_BBOX [ SRS ]    PS50119 ZF_BBOX [ Expasy ]
Prosite	PS00518 ZF_RING_1 [ SRS ]    PS00518 ZF_RING_1 [ Expasy ]
Prosite	PS50089 ZF_RING_2 [ SRS ]    PS50089 ZF_RING_2 [ Expasy ]
Interpro	IPR000315 Znf_B-box [ SRS ]    IPR000315 Znf_B-box [ EBI ]
Interpro	IPR001841 Znf_RING [ SRS ]    IPR001841 Znf_RING [ EBI ]
Interpro	IPR013083 Znf_RING/FYVE/PHD [ SRS ]    IPR013083 Znf_RING/FYVE/PHD [ EBI ]
CluSTr	O60858
Pfam	PF00643 zf-B_box [ SRS ]    PF00643 zf-B_box [ Sanger ]    pfam00643 [ NCBI-CDD ]
Pfam	PF00097 zf-C3HC4 [ SRS ]    PF00097 zf-C3HC4 [ Sanger ]    pfam00097 [ NCBI-CDD ]
Smart	SM00336 BBOX [EMBL]
Smart	SM00184 RING [EMBL]
Blocks	O60858
HPRD	10414
	Protein Interaction databases
DIP	O60858
IntAct	O60858
	Polymorphism : SNP, mutations, diseases
OMIM	605661    [ map ]
GENECLINICS	605661
SNP	TRIM13 [dbSNP-NCBI]
SNP	NM_001007278 [SNP-NCI]
SNP	NM_005798 [SNP-NCI]
SNP	NM_052811 [SNP-NCI]
SNP	NM_213590 [SNP-NCI]
SNP	TRIM13 [GeneSNPs - Utah]  TRIM13] [HGBASE - SRS]
HAPMAP	TRIM13 [HAPMAP]
COSMIC	TRIM13 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	TRIM13
	General knowledge
Family Browser	TRIM13 [UCSC Family Browser]
SOURCE	NM_001007278
SOURCE	NM_005798
SOURCE	NM_052811
SOURCE	NM_213590
SMD	Hs.436922
SAGE	Hs.436922
GO	signal transducer activity [Amigo]  signal transducer activity
GO	protein binding [Amigo]  protein binding
GO	intracellular [Amigo]  intracellular
GO	cytoplasm [Amigo]  cytoplasm
GO	zinc ion binding [Amigo]  zinc ion binding
GO	anatomical structure morphogenesis [Amigo]  anatomical structure morphogenesis
GO	positive regulation of I-kappaB kinase/NF-kappaB cascade [Amigo]  positive regulation of I-kappaB kinase/NF-kappaB cascade
GO	negative regulation of cell cycle [Amigo]  negative regulation of cell cycle
GO	metal ion binding [Amigo]  metal ion binding
PubGene	TRIM13
TreeFam	TRIM13
CTD	10206 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TRIM13 Related clones (RZPD - Berlin)
	PubMed
PubMed	13 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:36:22 2008