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TRIM31-AS1 (TRIM31 antisense RNA 1)

Identity

Alias_namesTRIM31 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) TRIM31-AS1
LocusID (NCBI) 104533120
Atlas_Id 76777
Location 6p22.1  [Link to chromosome band 6p22]
Location_base_pair Starts at 30105240 and ends at 30114724 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TRIM31-AS1   39761
Cards
Entrez_Gene (NCBI)TRIM31-AS1  104533120  TRIM31 antisense RNA 1
Aliases
GeneCards (Weizmann)TRIM31-AS1
Ensembl hg19 (Hinxton)ENSG00000231226 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231226 [Gene_View]  ENSG00000231226 [Sequence]  chr6:30105240-30114724 [Contig_View]  TRIM31-AS1 [Vega]
ICGC DataPortalENSG00000231226
TCGA cBioPortalTRIM31-AS1
AceView (NCBI)TRIM31-AS1
Genatlas (Paris)TRIM31-AS1
WikiGenes104533120
SOURCE (Princeton)TRIM31-AS1
Genetics Home Reference (NIH)TRIM31-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TRIM31-AS1  -     chr6:30105240-30114724 +  6p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIM31-AS1  -     6p22.1   [Description]    (hg19-Feb_2009)
EnsemblTRIM31-AS1 - 6p22.1 [CytoView hg19]  TRIM31-AS1 - 6p22.1 [CytoView hg38]
Mapping of homologs : NCBITRIM31-AS1 [Mapview hg19]  TRIM31-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW295408
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_113891 NT_167244 NT_167245 NT_167246 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)TRIM31-AS1
Cluster EST : UnigeneHs.548919 [ NCBI ]
CGAP (NCI)Hs.548919
Alternative Splicing GalleryENSG00000231226
Gene ExpressionTRIM31-AS1 [ NCBI-GEO ]   TRIM31-AS1 [ EBI - ARRAY_EXPRESS ]   TRIM31-AS1 [ SEEK ]   TRIM31-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM31-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104533120
GTEX Portal (Tissue expression)TRIM31-AS1
Human Protein AtlasENSG00000231226-TRIM31-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIM31-AS1
DMDM Disease mutations104533120
Blocks (Seattle)TRIM31-AS1
Human Protein Atlas [tissue]ENSG00000231226-TRIM31-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000231226
BioGRIDTRIM31-AS1
STRING (EMBL)TRIM31-AS1
ZODIACTRIM31-AS1
Ontologies - Pathways
Huge Navigator TRIM31-AS1 [HugePedia]
snp3D : Map Gene to Disease104533120
BioCentury BCIQTRIM31-AS1
ClinGenTRIM31-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104533120
Clinical trialTRIM31-AS1
Miscellaneous
canSAR (ICR)TRIM31-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIM31-AS1
EVEXTRIM31-AS1
GoPubMedTRIM31-AS1
iHOPTRIM31-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:36:34 CEST 2018

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