TRIM41 (tripartite motif containing 41)

2014-11-01  

Identity

HGNC
TRIM41
LOCATION
5q35.3
LOCUSID
90933
ALIAS
RINCK
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 90933
MIM: 610530
HGNC: 19013
Ensembl: ENSG00000146063

Variants:

dbSNP: 90933
ClinVar: 90933
TCGA: ENSG00000146063
COSMIC: TRIM41

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000146063ENST00000315073Q8WV44
ENSG00000146063ENST00000351937Q8WV44
ENSG00000146063ENST00000503114H0Y9T3
ENSG00000146063ENST00000514219H0YAD6
ENSG00000146063ENST00000515499D6REK2

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Immune SystemREACTOMER-HSA-168256
Adaptive Immune SystemREACTOMER-HSA-1280218
Class I MHC mediated antigen processing & presentationREACTOMER-HSA-983169
Antigen processing: Ubiquitination & Proteasome degradationREACTOMER-HSA-983168

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
178931512007Amplitude control of protein kinase C by RINCK, a novel E3 ubiquitin ligase.29
298990902018TRIM41-Mediated Ubiquitination of Nucleoprotein Limits Influenza A Virus Infection.12
160222812005Intracellular localization and domain organization of human TRIM41 proteins.2
304858142018The E3 Ubiquitin Ligases TRIM17 and TRIM41 Modulate α-Synuclein Expression by Regulating ZSCAN21.2

Citation

Dessen P

TRIM41 (tripartite motif containing 41)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75154/trim41