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TRIM49D2 (tripartite motif containing 49D2)

Identity

Alias_namesTRIM49L
TRIM49L1
TRIM49D2P
tripartite motif-containing 49-like
tripartite motif containing 49-like 1
tripartite motif containing 49D2, pseudogene
Other aliasTRIM48L1
TRIM49D1
HGNC (Hugo) TRIM49D2
LocusID (NCBI) 729384
Atlas_Id 76656
Location 11q14.3  [Link to chromosome band 11q14]
Location_base_pair Starts at 89657232 and ends at 89666229 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRIM49D2   37217
Cards
Entrez_Gene (NCBI)TRIM49D2  729384  tripartite motif containing 49D2
AliasesTRIM48L1; TRIM49D1; TRIM49D2P; TRIM49L; 
TRIM49L1
GeneCards (Weizmann)TRIM49D2
Ensembl hg19 (Hinxton)ENSG00000233802 [Gene_View]  chr11:89657232-89666229 [Contig_View]  TRIM49D2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000233802 [Gene_View]  chr11:89657232-89666229 [Contig_View]  TRIM49D2 [Vega]
ICGC DataPortalENSG00000233802
TCGA cBioPortalTRIM49D2
AceView (NCBI)TRIM49D2
Genatlas (Paris)TRIM49D2
WikiGenes729384
SOURCE (Princeton)TRIM49D2
Genetics Home Reference (NIH)TRIM49D2
Genomic and cartography
GoldenPath hg19 (UCSC)TRIM49D2  -     chr11:89657232-89666229 +  11q14.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TRIM49D2  -     11q14.3   [Description]    (hg38-Dec_2013)
EnsemblTRIM49D2 - 11q14.3 [CytoView hg19]  TRIM49D2 - 11q14.3 [CytoView hg38]
Mapping of homologs : NCBITRIM49D2 [Mapview hg19]  TRIM49D2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)JF968447 JF968448
RefSeq transcript (Entrez)NM_001105522
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929380
Consensus coding sequences : CCDS (NCBI)TRIM49D2
Cluster EST : UnigeneHs.705301 [ NCBI ]
CGAP (NCI)Hs.705301
Alternative Splicing GalleryENSG00000233802
Gene ExpressionTRIM49D2 [ NCBI-GEO ]   TRIM49D2 [ EBI - ARRAY_EXPRESS ]   TRIM49D2 [ SEEK ]   TRIM49D2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM49D2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729384
GTEX Portal (Tissue expression)TRIM49D2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIM49D2
DMDM Disease mutations729384
Blocks (Seattle)TRIM49D2
Human Protein AtlasENSG00000233802
Protein Interaction databases
FunCoupENSG00000233802
BioGRIDTRIM49D2
STRING (EMBL)TRIM49D2
ZODIACTRIM49D2
Ontologies - Pathways
Huge Navigator TRIM49D2 [HugePedia]
snp3D : Map Gene to Disease729384
BioCentury BCIQTRIM49D2
ClinGenTRIM49D2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729384
Chemical/Pharm GKB GenePA165543723
Clinical trialTRIM49D2
Miscellaneous
canSAR (ICR)TRIM49D2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIM49D2
EVEXTRIM49D2
GoPubMedTRIM49D2
iHOPTRIM49D2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:49:43 CET 2017

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