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TRIM52-AS1 (TRIM52 antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) TRIM52-AS1
LocusID (NCBI) 100507602
Atlas_Id 75170
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 181261212 and ends at 181264566 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TRIM52-AS1   49006
Cards
Entrez_Gene (NCBI)TRIM52-AS1  100507602  TRIM52 antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)TRIM52-AS1
Ensembl hg19 (Hinxton)ENSG00000248275 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248275 [Gene_View]  chr5:181261212-181264566 [Contig_View]  TRIM52-AS1 [Vega]
ICGC DataPortalENSG00000248275
TCGA cBioPortalTRIM52-AS1
AceView (NCBI)TRIM52-AS1
Genatlas (Paris)TRIM52-AS1
WikiGenes100507602
SOURCE (Princeton)TRIM52-AS1
Genetics Home Reference (NIH)TRIM52-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TRIM52-AS1  -     chr5:181261212-181264566 +  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIM52-AS1  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblTRIM52-AS1 - 5q35.3 [CytoView hg19]  TRIM52-AS1 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBITRIM52-AS1 [Mapview hg19]  TRIM52-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC016291 BM014221 BQ778070 CK905273 HY116666
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRIM52-AS1
Cluster EST : UnigeneHs.725793 [ NCBI ]
CGAP (NCI)Hs.725793
Alternative Splicing GalleryENSG00000248275
Gene ExpressionTRIM52-AS1 [ NCBI-GEO ]   TRIM52-AS1 [ EBI - ARRAY_EXPRESS ]   TRIM52-AS1 [ SEEK ]   TRIM52-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM52-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507602
GTEX Portal (Tissue expression)TRIM52-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIM52-AS1
DMDM Disease mutations100507602
Blocks (Seattle)TRIM52-AS1
Human Protein AtlasENSG00000248275
Protein Interaction databases
FunCoupENSG00000248275
BioGRIDTRIM52-AS1
STRING (EMBL)TRIM52-AS1
ZODIACTRIM52-AS1
Ontologies - Pathways
Huge Navigator TRIM52-AS1 [HugePedia]
snp3D : Map Gene to Disease100507602
BioCentury BCIQTRIM52-AS1
ClinGenTRIM52-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507602
Clinical trialTRIM52-AS1
Miscellaneous
canSAR (ICR)TRIM52-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIM52-AS1
EVEXTRIM52-AS1
GoPubMedTRIM52-AS1
iHOPTRIM52-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:47:09 CEST 2017

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