Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TRIM52-AS1 (TRIM52 antisense RNA 1 (head to head))


Alias (NCBI)-
HGNC (Hugo) TRIM52-AS1
LocusID (NCBI) 100507602
Atlas_Id 75170
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 181261212 and ends at 181272307 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)TRIM52-AS1   49006
Entrez_Gene (NCBI)TRIM52-AS1    TRIM52 antisense RNA 1 (head to head)
GeneCards (Weizmann)TRIM52-AS1
Ensembl hg19 (Hinxton)ENSG00000248275 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248275 [Gene_View]  ENSG00000248275 [Sequence]  chr5:181261212-181272307 [Contig_View]  TRIM52-AS1 [Vega]
ICGC DataPortalENSG00000248275
TCGA cBioPortalTRIM52-AS1
AceView (NCBI)TRIM52-AS1
Genatlas (Paris)TRIM52-AS1
SOURCE (Princeton)TRIM52-AS1
Genetics Home Reference (NIH)TRIM52-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TRIM52-AS1  -     chr5:181261212-181272307 +  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIM52-AS1  -     5q35.3   [Description]    (hg19-Feb_2009)
GoldenPathTRIM52-AS1 - 5q35.3 [CytoView hg19]  TRIM52-AS1 - 5q35.3 [CytoView hg38]
Genome Data Viewer NCBITRIM52-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC016291 BM014221 BQ778070 CK905273 HY116666
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)TRIM52-AS1
Gene ExpressionTRIM52-AS1 [ NCBI-GEO ]   TRIM52-AS1 [ EBI - ARRAY_EXPRESS ]   TRIM52-AS1 [ SEEK ]   TRIM52-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM52-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TRIM52-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507602
GTEX Portal (Tissue expression)TRIM52-AS1
Human Protein AtlasENSG00000248275-TRIM52-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIM52-AS1
Human Protein Atlas [tissue]ENSG00000248275-TRIM52-AS1 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:56 CEST 2021

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