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TRIM64B (tripartite motif containing 64B)

Identity

Alias_namestripartite motif-containing 64B
Other alias-
HGNC (Hugo) TRIM64B
LocusID (NCBI) 642446
Atlas_Id 75175
Location 11q14.3  [Link to chromosome band 11q14]
Location_base_pair Starts at 89870438 and ends at 89876017 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TRIM64B   37147
Cards
Entrez_Gene (NCBI)TRIM64B  642446  tripartite motif containing 64B
Aliases
GeneCards (Weizmann)TRIM64B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:89870438-89876017 [Contig_View]  TRIM64B [Vega]
TCGA cBioPortalTRIM64B
AceView (NCBI)TRIM64B
Genatlas (Paris)TRIM64B
WikiGenes642446
SOURCE (Princeton)TRIM64B
Genetics Home Reference (NIH)TRIM64B
Genomic and cartography
GoldenPath hg38 (UCSC)TRIM64B  -     chr11:89870438-89876017 -  11q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIM64B  -     11q14.3   [Description]    (hg19-Feb_2009)
EnsemblTRIM64B - 11q14.3 [CytoView hg19]  TRIM64B - 11q14.3 [CytoView hg38]
Mapping of homologs : NCBITRIM64B [Mapview hg19]  TRIM64B [Mapview hg38]
Gene and transcription
Genbank (Entrez)JF968449
RefSeq transcript (Entrez)NM_001164397
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRIM64B
Cluster EST : UnigeneHs.730588 [ NCBI ]
CGAP (NCI)Hs.730588
Gene ExpressionTRIM64B [ NCBI-GEO ]   TRIM64B [ EBI - ARRAY_EXPRESS ]   TRIM64B [ SEEK ]   TRIM64B [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM64B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642446
GTEX Portal (Tissue expression)TRIM64B
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NI03   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NI03  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NI03
Splice isoforms : SwissVarA6NI03
PhosPhoSitePlusA6NI03
Domaine pattern : Prosite (Expaxy)B302_SPRY (PS50188)    ZF_BBOX (PS50119)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domains : Interpro (EBI)B30.2/SPRY    Butyrophylin    ConA-like_dom    SPRY_dom    Znf_B-box    Znf_C3HC4_RING-type    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS   
Domain families : Pfam (Sanger)SPRY (PF00622)    zf-C3HC4 (PF00097)   
Domain families : Pfam (NCBI)pfam00622    pfam00097   
Domain families : Smart (EMBL)BBOX (SM00336)  RING (SM00184)  SPRY (SM00449)  
Conserved Domain (NCBI)TRIM64B
DMDM Disease mutations642446
Blocks (Seattle)TRIM64B
SuperfamilyA6NI03
Peptide AtlasA6NI03
IPIIPI00739890   
Protein Interaction databases
DIP (DOE-UCLA)A6NI03
IntAct (EBI)A6NI03
BioGRIDTRIM64B
STRING (EMBL)TRIM64B
ZODIACTRIM64B
Ontologies - Pathways
QuickGOA6NI03
Ontology : AmiGOintracellular  zinc ion binding  
Ontology : EGO-EBIintracellular  zinc ion binding  
NDEx NetworkTRIM64B
Atlas of Cancer Signalling NetworkTRIM64B
Wikipedia pathwaysTRIM64B
Orthology - Evolution
OrthoDB642446
Phylogenetic Trees/Animal Genes : TreeFamTRIM64B
HOVERGENA6NI03
HOGENOMA6NI03
Homologs : HomoloGeneTRIM64B
Homology/Alignments : Family Browser (UCSC)TRIM64B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTRIM64B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TRIM64B
dbVarTRIM64B
ClinVarTRIM64B
1000_GenomesTRIM64B 
Exome Variant ServerTRIM64B
ExAC (Exome Aggregation Consortium)TRIM64B (select the gene name)
Genetic variants : HAPMAP642446
Genomic Variants (DGV)TRIM64B [DGVbeta]
DECIPHERTRIM64B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTRIM64B 
Mutations
ICGC Data PortalTRIM64B 
TCGA Data PortalTRIM64B 
Broad Tumor PortalTRIM64B
OASIS PortalTRIM64B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTRIM64B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDTRIM64B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch TRIM64B
DgiDB (Drug Gene Interaction Database)TRIM64B
DoCM (Curated mutations)TRIM64B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TRIM64B (select a term)
intoGenTRIM64B
Cancer3DTRIM64B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenTRIM64B
Genetic Testing Registry TRIM64B
NextProtA6NI03 [Medical]
TSGene642446
GENETestsTRIM64B
Target ValidationTRIM64B
Huge Navigator TRIM64B [HugePedia]
snp3D : Map Gene to Disease642446
BioCentury BCIQTRIM64B
ClinGenTRIM64B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642446
Chemical/Pharm GKB GenePA165543724
Clinical trialTRIM64B
Miscellaneous
canSAR (ICR)TRIM64B (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIM64B
EVEXTRIM64B
GoPubMedTRIM64B
iHOPTRIM64B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:47:10 CEST 2017

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