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TRIM64B (tripartite motif containing 64B)

Identity

Alias (NCBI)-
HGNC (Hugo) TRIM64B
HGNC Previous nametripartite motif-containing 64B
LocusID (NCBI) 642446
Atlas_Id 75175
Location 11q14.3  [Link to chromosome band 11q14]
Location_base_pair Starts at 89870587 and ends at 89876017 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)TRIM64B   37147
Cards
Entrez_Gene (NCBI)TRIM64B    tripartite motif containing 64B
Aliases
GeneCards (Weizmann)TRIM64B
Ensembl hg19 (Hinxton)ENSG00000189253 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189253 [Gene_View]  ENSG00000189253 [Sequence]  chr11:89870587-89876017 [Contig_View]  TRIM64B [Vega]
ICGC DataPortalENSG00000189253
TCGA cBioPortalTRIM64B
AceView (NCBI)TRIM64B
Genatlas (Paris)TRIM64B
SOURCE (Princeton)TRIM64B
Genetics Home Reference (NIH)TRIM64B
Genomic and cartography
GoldenPath hg38 (UCSC)TRIM64B  -     chr11:89870587-89876017 -  11q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIM64B  -     11q14.3   [Description]    (hg19-Feb_2009)
GoldenPathTRIM64B - 11q14.3 [CytoView hg19]  TRIM64B - 11q14.3 [CytoView hg38]
ImmunoBaseENSG00000189253
Genome Data Viewer NCBITRIM64B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)JF968449
RefSeq transcript (Entrez)NM_001164397
Consensus coding sequences : CCDS (NCBI)TRIM64B
Gene ExpressionTRIM64B [ NCBI-GEO ]   TRIM64B [ EBI - ARRAY_EXPRESS ]   TRIM64B [ SEEK ]   TRIM64B [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM64B [ Firebrowse - Broad ]
GenevisibleExpression of TRIM64B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642446
GTEX Portal (Tissue expression)TRIM64B
Human Protein AtlasENSG00000189253-TRIM64B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NI03   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NI03  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NI03
PhosPhoSitePlusA6NI03
Domaine pattern : Prosite (Expaxy)B302_SPRY (PS50188)    ZF_BBOX (PS50119)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domains : Interpro (EBI)B30.2/SPRY    B30.2/SPRY_sf    Butyrophylin_SPRY    ConA-like_dom_sf    SPRY_dom    Znf_B-box    Znf_C3HC4_RING-type    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS   
Domain families : Pfam (Sanger)SPRY (PF00622)    zf-C3HC4 (PF00097)   
Domain families : Pfam (NCBI)pfam00622    pfam00097   
Domain families : Smart (EMBL)BBOX (SM00336)  RING (SM00184)  SPRY (SM00449)  
Conserved Domain (NCBI)TRIM64B
SuperfamilyA6NI03
AlphaFold pdb e-kbA6NI03   
Human Protein Atlas [tissue]ENSG00000189253-TRIM64B [tissue]
Protein Interaction databases
DIP (DOE-UCLA)A6NI03
IntAct (EBI)A6NI03
BioGRIDTRIM64B
STRING (EMBL)TRIM64B
ZODIACTRIM64B
Ontologies - Pathways
QuickGOA6NI03
Ontology : AmiGOcytoplasm  zinc ion binding  regulation of gene expression  protein ubiquitination  innate immune response  ubiquitin protein ligase activity  
Ontology : EGO-EBIcytoplasm  zinc ion binding  regulation of gene expression  protein ubiquitination  innate immune response  ubiquitin protein ligase activity  
NDEx NetworkTRIM64B
Atlas of Cancer Signalling NetworkTRIM64B
Wikipedia pathwaysTRIM64B
Orthology - Evolution
OrthoDB642446
GeneTree (enSembl)ENSG00000189253
Phylogenetic Trees/Animal Genes : TreeFamTRIM64B
Homologs : HomoloGeneTRIM64B
Homology/Alignments : Family Browser (UCSC)TRIM64B
Gene fusions - Rearrangements
Fusion : QuiverTRIM64B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTRIM64B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TRIM64B
dbVarTRIM64B
ClinVarTRIM64B
MonarchTRIM64B
1000_GenomesTRIM64B 
Exome Variant ServerTRIM64B
GNOMAD BrowserENSG00000189253
Varsome BrowserTRIM64B
ACMGTRIM64B variants
VarityA6NI03
Genomic Variants (DGV)TRIM64B [DGVbeta]
DECIPHERTRIM64B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTRIM64B 
Mutations
ICGC Data PortalTRIM64B 
TCGA Data PortalTRIM64B 
Broad Tumor PortalTRIM64B
OASIS PortalTRIM64B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTRIM64B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTRIM64B
Mutations and Diseases : HGMDTRIM64B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaTRIM64B
DgiDB (Drug Gene Interaction Database)TRIM64B
DoCM (Curated mutations)TRIM64B
CIViC (Clinical Interpretations of Variants in Cancer)TRIM64B
Cancer3DTRIM64B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTRIM64B
MedgenTRIM64B
Genetic Testing Registry TRIM64B
NextProtA6NI03 [Medical]
GENETestsTRIM64B
Target ValidationTRIM64B
Huge Navigator TRIM64B [HugePedia]
ClinGenTRIM64B
Clinical trials, drugs, therapy
MyCancerGenomeTRIM64B
Protein Interactions : CTDTRIM64B
Pharm GKB GenePA165543724
PharosA6NI03
Clinical trialTRIM64B
Miscellaneous
canSAR (ICR)TRIM64B
HarmonizomeTRIM64B
DataMed IndexTRIM64B
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRIM64B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:26:58 CEST 2021

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