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TRIM78P (tripartite motif containing 78, pseudogene)

Identity

Alias_namesTRIMP1
tripartite motif-containing pseudogene 1
tripartite motif-containing 78, pseudogene
Other alias
HGNC (Hugo) TRIM78P
LocusID (NCBI) 117852
Atlas_Id 75186
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5664412 and ends at 5687610 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRIM78P   17232
Cards
Entrez_Gene (NCBI)TRIM78P  117852  tripartite motif containing 78, pseudogene
AliasesTRIMP1
GeneCards (Weizmann)TRIM78P
Ensembl hg19 (Hinxton) [Gene_View]  chr11:5664412-5687610 [Contig_View]  TRIM78P [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:5664412-5687610 [Contig_View]  TRIM78P [Vega]
TCGA cBioPortalTRIM78P
AceView (NCBI)TRIM78P
Genatlas (Paris)TRIM78P
WikiGenes117852
SOURCE (Princeton)TRIM78P
Genetics Home Reference (NIH)TRIM78P
Genomic and cartography
GoldenPath hg19 (UCSC)TRIM78P  -     chr11:5664412-5687610 +  11p15.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)TRIM78P  -     11p15.4   [Description]    (hg38-Dec_2013)
EnsemblTRIM78P - 11p15.4 [CytoView hg19]  TRIM78P - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBITRIM78P [Mapview hg19]  TRIM78P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF230412 AL360159 AL360183
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)AC_000143 NC_000011 NT_009237 NW_001838021
Consensus coding sequences : CCDS (NCBI)TRIM78P
Cluster EST : UnigeneHs.742023 [ NCBI ]
CGAP (NCI)Hs.742023
Gene ExpressionTRIM78P [ NCBI-GEO ]   TRIM78P [ EBI - ARRAY_EXPRESS ]   TRIM78P [ SEEK ]   TRIM78P [ MEM ]
Gene Expression Viewer (FireBrowse)TRIM78P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)117852
GTEX Portal (Tissue expression)TRIM78P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIM78P
DMDM Disease mutations117852
Blocks (Seattle)TRIM78P
Protein Interaction databases
BioGRIDTRIM78P
STRING (EMBL)TRIM78P
ZODIACTRIM78P
Ontologies - Pathways
Huge Navigator TRIM78P [HugePedia]
snp3D : Map Gene to Disease117852
BioCentury BCIQTRIM78P
ClinGenTRIM78P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD117852
Chemical/Pharm GKB GenePA38214
Clinical trialTRIM78P
Miscellaneous
canSAR (ICR)TRIM78P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRIM78P
EVEXTRIM78P
GoPubMedTRIM78P
iHOPTRIM78P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:49:49 CET 2017

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